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nf-resequencing-mem
Nextflow resequencing pipeline with bwa-mem and freebayes
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:sparkles: Annotate VCF file with SnpEff
#59
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bunop
closed
5 months ago
bunop
commented
5 months ago
[x] add snpeff to the pipeline
[x] conditional check for snpeff analysis
[x] snpeff using community databases
[x] snpeff using custom database
[x] compress and index VCF file