:zap: optimize `samtools/depth` step - Githubissues

cnr-ibba / nf-resequencing-mem

Nextflow resequencing pipeline with bwa-mem and freebayes

MIT License

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:zap: optimize `samtools/depth` step #73

Closed bunop closed 5 months ago

bunop commented 5 months ago

[ ] ~~use bgzip with multi-threads when creating samtools/depth~~
[x] try to split samtools/depth by chromosomes
[ ] raise samtools/depth required time