cnr-isti-vclab / PyMeshLab

The open source mesh processing python library
GNU General Public License v3.0
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dyld: Symbol not found: ____chkstk_darwin #232

Closed Nutshell1 closed 2 years ago

Nutshell1 commented 2 years ago

Hi,

I am trying to run boolean operations between some meshes as follows: ms.add_mesh(m1) ms.add_mesh(m2) ms.generate_boolean_intersection()

But I keep getting this error and python crashes dyld: Symbol not found: ____chkstk_darwin Referenced from: /usr/local/lib/python3.10/site-packages/pymeshlab/PlugIns/../Frameworks/libgmp.10.dylib Expected in: flat namespace

Is this a mac issue? I tried passing parameters such as first_mesh = 1,.... but still the same.

Please help. My project involves iteratively stitching meshes, cleaning up (meshing decimation quadric edge collapse, ...) and repeat. I have a workaround using trimesh to run the boolean operations but I would rather keep everything neat and clean using just pymeshlab.

Thanks

Nutshell1 commented 2 years ago

Just an update: I'm using a 27" Late 2009 iMac 10.1 running Mac OS 10.13.6 High Sierra

I also tried running the boolean operations on meshlab 64bit version 2022.02 and is crashes every time even with the simplest meshes.

Here's the detailed crash report sent to apple. Sorry its really long. Please help-

Process: meshlab [5822] Path: /Applications/MeshLab2022.02.app/Contents/MacOS/meshlab Identifier: com.vcg.meshlab Version: 2022.02 (2022.02) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: meshlab [5822] User ID: 501

Date/Time: 2022-07-12 18:20:44.386 -0700 OS Version: Mac OS X 10.13.6 (17G14042) Report Version: 12 Anonymous UUID: 4F873B14-179A-DDD3-577F-878CEE83F9E5

Sleep/Wake UUID: 1E9C4732-1153-4E5E-BBAB-929A1BF4E401

Time Awake Since Boot: 4100 seconds Time Since Wake: 2800 seconds

System Integrity Protection: enabled

Crashed Thread: 5

Exception Type: EXC_CRASH (SIGABRT) Exception Codes: 0x0000000000000000, 0x0000000000000000 Exception Note: EXC_CORPSE_NOTIFY

Termination Reason: DYLD, [0x4] Symbol missing

Dyld Error Message: Symbol not found: ____chkstk_darwin Referenced from: /Applications/MeshLab2022.02.app/Contents/PlugIns/../Frameworks/libgmp.10.dylib Expected in: flat namespace

Thread 0:: Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff7dbe9a46 psynch_mutexwait + 10 1 libsystem_pthread.dylib 0x00007fff7ddb1b9d _pthread_mutex_lock_wait + 83 2 libsystem_pthread.dylib 0x00007fff7ddaf4c8 _pthread_mutex_lock_slow + 253 3 libdyld.dylib 0x00007fff7da99128 dyldGlobalLockAcquire() + 16 4 dyld 0x00000001099e3a86 ImageLoaderMachOCompressed::doBindFastLazySymbol(unsigned int, ImageLoader::LinkContext const&, void ()(), void ()()) + 54 5 dyld 0x00000001099ca558 dyld::fastBindLazySymbol(ImageLoader**, unsigned long) + 89 6 libdyld.dylib 0x00007fff7da99292 dyld_stub_binder + 282 7 ??? 0x000000010c59eb10 0 + 4502186768 8 libfilter_mesh_booleans.so 0x000000010c31c8ae int cmp<__mpq_struct [1], gmp_binary_expr<gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_binary_multiplies>, mpq_struct [1], gmp_binary_expr<gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_binary_multiplies> >(gmp_expr<__mpq_struct [1], gmp_binary_expr<gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_binary_multiplies> > const&, gmp_expr<mpq_struct [1], gmp_binary_expr<gmp_expr<mpq_struct [1], mpq_struct [1]>, __gmp_expr<mpq_struct [1], mpq_struct [1]>, __gmp_binary_multiplies> > const&) + 46 9 libfilter_mesh_booleans.so 0x000000010c31c5ac CGAL::Equal_to<gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_expr<mpq_struct [1], __mpq_struct [1]> >::result_type CGAL::equal_planeC3<gmp_expr<mpq_struct [1], __mpq_struct [1]> >(gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], __mpq_struct [1]> const&, gmp_expr<mpq_struct [1], mpq_struct [1]> const&) + 472 10 libfilter_mesh_booleans.so 0x000000010c31b3e5 bool CGAL::Filtered_predicate<CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<CGAL::Interval_nt > >, CGAL::Cartesian_converter<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick>, CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> >, CGAL::NT_converter<double, gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::Cartesian_converter<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick>, CGAL::Simple_cartesian<CGAL::Interval_nt >, CGAL::NT_converter<double, CGAL::Interval_nt > >, true>::operator()<CGAL::Plane_3, CGAL::Plane_3 >(CGAL::Plane_3 const&, CGAL::Plane_3 const&) const + 393 11 libfilter_mesh_booleans.so 0x000000010c33cddc bool CGAL::Static_filtered_predicate<CGAL::Simple_cartesian<CGAL::Interval_nt >, CGAL::Filtered_predicate<CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<__gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<CGAL::Interval_nt > >, CGAL::Exact_converter<CGAL::Epeck, CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], __mpq_struct [1]> > >, CGAL::Approx_converter<CGAL::Epeck, CGAL::Simple_cartesian<CGAL::Interval_nt > >, true>, CGAL::internal::Static_filters_predicates::Equal_3<CGAL::Filtered_kernel_base<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick> > > >::operator()<CGAL::Plane_3, CGAL::Plane_3 >(CGAL::Plane_3 const&, CGAL::Plane_3 const&) const + 278 12 libfilter_mesh_booleans.so 0x000000010c33b8af igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<mpq_struct [1], __mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::double_shared_vertex(CGAL::Triangle_3 const&, CGAL::Triangle_3 const&, long, long, std::1::vector<std::1::pair<long, long>, std::1::allocator<std::1::pair<long, long> > >) + 109 13 libfilter_mesh_booleans.so 0x000000010c33b502 igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<mpq_struct [1], __mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::process_intersecting_boxes()::'lambda'(unsigned long, unsigned long)::operator()(unsigned long, unsigned long) const + 1196 14 libfilter_mesh_booleans.so 0x000000010c33356a igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<mpq_struct [1], __mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::process_intersecting_boxes() + 866 15 libfilter_mesh_booleans.so 0x000000010c332a79 igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<mpq_struct [1], __mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::SelfIntersectMesh(Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, igl::copyleft::cgal::RemeshSelfIntersectionsParam const&, Eigen::PlainObjectBase<Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<mpq_struct [1], mpq_struct [1]> >, -1, -1, 0, -1, -1> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1, 0, -1, -1> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1, 0, -1, 1> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1, 0, -1, 1> >&) + 919 16 libfilter_mesh_booleans.so 0x000000010c3131f2 bool igl::copyleft::cgal::mesh_boolean<Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<unsigned long, 2, 1, 0, 2, 1>, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >(Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<unsigned long, 2, 1, 0, 2, 1> > const&, std::1::function<int (Eigen::Matrix<int, 1, -1, 1, 1, -1>)> const&, std::__1::function<int (int, int)> const&, Eigen::PlainObjectBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1, 0, -1, 1> >&) + 189 17 libfilter_mesh_booleans.so 0x000000010c312770 bool igl::copyleft::cgal::mesh_boolean<Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >(Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, std::1::function<int (Eigen::Matrix<int, 1, -1, 1, 1, -1>)> const&, std::1::function<int (int, int)> const&, Eigen::PlainObjectBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1, 0, -1, 1> >&) + 632 18 libfilter_mesh_booleans.so 0x000000010c3105d2 bool igl::copyleft::cgal::mesh_boolean<Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >(Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> > const&, Eigen::MatrixBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> > const&, igl::MeshBooleanType const&, Eigen::PlainObjectBase<Eigen::Matrix<float, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 3, 0, -1, 3> >&, Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1, 0, -1, 1> >&) + 140 19 libfilter_mesh_booleans.so 0x000000010c3100bd FilterMeshBooleans::booleanOperation(MeshDocument&, MeshModel const&, MeshModel const&, int, bool, bool, bool, bool) + 349 20 libfilter_mesh_booleans.so 0x000000010c30fdd2 FilterMeshBooleans::applyFilter(QAction const, RichParameterList const&, MeshDocument&, unsigned int&, bool ()(int, char const)) + 776 21 libfilter_mesh_booleans.so 0x000000010c310532 non-virtual thunk to FilterMeshBooleans::applyFilter(QAction const, RichParameterList const&, MeshDocument&, unsigned int&, bool ()(int, char const)) + 18 22 com.vcg.meshlab 0x00000001061fc641 MainWindow::executeFilter(QAction const, RichParameterList const&, bool, bool) + 1183 23 org.qt-project.QtCore 0x000000010741e0d5 0x1071f2000 + 2277589 24 com.vcg.meshlab 0x00000001061b1a87 FilterDockDialog::applyButtonClicked(QAction const, RichParameterList, bool, bool) + 83 25 com.vcg.meshlab 0x000000010622b9bc FilterDockDialog::on_applyPushButton_clicked() + 98 26 com.vcg.meshlab 0x00000001061b1b3e FilterDockDialog::qt_metacall(QMetaObject::Call, int, void) + 62 27 org.qt-project.QtCore 0x000000010741df6e 0x1071f2000 + 2277230 28 org.qt-project.QtWidgets 0x00000001066c91df 0x1065cf000 + 1024479 29 org.qt-project.QtWidgets 0x00000001066c9059 0x1065cf000 + 1024089 30 org.qt-project.QtWidgets 0x00000001066ca20f QAbstractButton::mouseReleaseEvent(QMouseEvent) + 271 31 org.qt-project.QtWidgets 0x0000000106619dfd QWidget::event(QEvent) + 445 32 org.qt-project.QtWidgets 0x00000001065df9ea QApplicationPrivate::notify_helper(QObject, QEvent) + 266 33 org.qt-project.QtWidgets 0x00000001065e2755 QApplication::notify(QObject, QEvent) + 6965 34 libmeshlab-common.dylib 0x00000001063ac82e MeshLabApplication::notify(QObject, QEvent) + 14 35 org.qt-project.QtCore 0x00000001073eaa34 QCoreApplication::notifyInternal2(QObject, QEvent) + 212 36 org.qt-project.QtWidgets 0x00000001065e0310 QApplicationPrivate::sendMouseEvent(QWidget, QMouseEvent, QWidget, QWidget, QWidget, QPointer&, bool, bool) + 896 37 org.qt-project.QtWidgets 0x0000000106639022 0x1065cf000 + 434210 38 org.qt-project.QtWidgets 0x00000001066376e9 0x1065cf000 + 427753 39 org.qt-project.QtWidgets 0x00000001065df9ea QApplicationPrivate::notify_helper(QObject, QEvent) + 266 40 org.qt-project.QtWidgets 0x00000001065e0e11 QApplication::notify(QObject, QEvent) + 497 41 libmeshlab-common.dylib 0x00000001063ac82e MeshLabApplication::notify(QObject, QEvent) + 14 42 org.qt-project.QtCore 0x00000001073eaa34 QCoreApplication::notifyInternal2(QObject, QEvent) + 212 43 org.qt-project.QtGui 0x0000000106bcae2e QGuiApplicationPrivate::processMouseEvent(QWindowSystemInterfacePrivate::MouseEvent*) + 3534 44 org.qt-project.QtGui 0x0000000106bafd7b QWindowSystemInterface::sendWindowSystemEvents(QFlags) + 219 45 libqcocoa.dylib 0x000000010937d260 0x109343000 + 238176 46 libqcocoa.dylib 0x000000010937d9c8 0x109343000 + 240072 47 com.apple.CoreFoundation 0x00007fff567e7b01 CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION + 17 48 com.apple.CoreFoundation 0x00007fff5689fe5c CFRunLoopDoSource0 + 108 49 com.apple.CoreFoundation 0x00007fff567caab0 CFRunLoopDoSources0 + 208 50 com.apple.CoreFoundation 0x00007fff567c9f2d CFRunLoopRun + 1293 51 com.apple.CoreFoundation 0x00007fff567c9787 CFRunLoopRunSpecific + 487 52 com.apple.HIToolbox 0x00007fff55b0ed96 RunCurrentEventLoopInMode + 286 53 com.apple.HIToolbox 0x00007fff55b0ea0f ReceiveNextEventCommon + 366 54 com.apple.HIToolbox 0x00007fff55b0e884 _BlockUntilNextEventMatchingListInModeWithFilter + 64 55 com.apple.AppKit 0x00007fff53dbba3b _DPSNextEvent + 2085 56 com.apple.AppKit 0x00007fff54551e34 -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 3044 57 com.apple.AppKit 0x00007fff53db084d -[NSApplication run] + 764 58 libqcocoa.dylib 0x000000010937c62f 0x109343000 + 235055 59 org.qt-project.QtCore 0x00000001073e6acf QEventLoop::exec(QFlags) + 431 60 org.qt-project.QtCore 0x00000001073eb042 QCoreApplication::exec() + 130 61 com.vcg.meshlab 0x00000001061e2a71 main + 2401 62 libdyld.dylib 0x00007fff7da99015 start + 1

Thread 1:: Qt bearer thread 0 libsystem_kernel.dylib 0x00007fff7dbeb09a poll + 10 1 org.qt-project.QtCore 0x000000010744d01a qt_safe_poll(pollfd, unsigned int, timespec const) + 90 2 org.qt-project.QtCore 0x000000010744ea21 QEventDispatcherUNIX::processEvents(QFlags) + 849 3 org.qt-project.QtCore 0x00000001073e6acf QEventLoop::exec(QFlags) + 431 4 org.qt-project.QtCore 0x0000000107213603 QThread::exec() + 131 5 org.qt-project.QtCore 0x0000000107214619 0x1071f2000 + 140825 6 libsystem_pthread.dylib 0x00007fff7ddb1661 _pthread_body + 340 7 libsystem_pthread.dylib 0x00007fff7ddb150d _pthread_start + 377 8 libsystem_pthread.dylib 0x00007fff7ddb0bf9 thread_start + 13

Thread 2:: com.apple.NSEventThread 0 libsystem_kernel.dylib 0x00007fff7dbe01fa mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff7dbdf714 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff567cadc5 CFRunLoopServiceMachPort + 341 3 com.apple.CoreFoundation 0x00007fff567ca117 CFRunLoopRun + 1783 4 com.apple.CoreFoundation 0x00007fff567c9787 CFRunLoopRunSpecific + 487 5 com.apple.AppKit 0x00007fff53ef8fc4 _NSEventThread + 184 6 libsystem_pthread.dylib 0x00007fff7ddb1661 _pthread_body + 340 7 libsystem_pthread.dylib 0x00007fff7ddb150d _pthread_start + 377 8 libsystem_pthread.dylib 0x00007fff7ddb0bf9 thread_start + 13

Thread 3: 0 libsystem_pthread.dylib 0x00007fff7ddb0bdc start_wqthread + 0 1 ??? 0x0007000800010003 0 + 1970359196778499

Thread 4: 0 libsystem_pthread.dylib 0x00007fff7ddb0bdc start_wqthread + 0 1 ??? 0x0001000600000006 0 + 281500746514438

Thread 5 Crashed: 0 dyld 0x00000001099f7256 abort_with_payload + 10 1 dyld 0x00000001099f6bc8 abort_with_payload_wrapper_internal + 89 2 dyld 0x00000001099f6bf5 abort_with_payload + 9 3 dyld 0x00000001099ca482 dyld::halt(char const*) + 354 4 dyld 0x00000001099ca5a9 dyld::fastBindLazySymbol(ImageLoader**, unsigned long) + 170 5 libdyld.dylib 0x00007fff7da99292 dyld_stub_binder + 282 6 ??? 0x000000010c59eb10 0 + 4502186768 7 libfilter_mesh_booleans.so 0x000000010c31c8ae int cmp<mpq_struct [1], gmp_binary_expr<gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_binary_multiplies>, mpq_struct [1], gmp_binary_expr<gmp_expr<mpq_struct [1], mpq_struct [1]>, __gmp_expr<mpq_struct [1], mpq_struct [1]>, gmp_binary_multiplies> >(gmp_expr<mpq_struct [1], gmp_binary_expr<gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_expr<mpq_struct [1], __mpq_struct [1]>, gmp_binary_multiplies> > const&, gmp_expr<__mpq_struct [1], gmp_binary_expr<gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_expr<__mpq_struct [1], mpq_struct [1]>, gmp_binary_multiplies> > const&) + 46 8 libfilter_mesh_booleans.so 0x000000010c31c5ac CGAL::Equal_to<__gmp_expr<mpq_struct [1], mpq_struct [1]>, __gmp_expr<mpq_struct [1], mpq_struct [1]> >::result_type CGAL::equal_planeC3<__gmp_expr<mpq_struct [1], mpq_struct [1]> >(__gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&, __gmp_expr<mpq_struct [1], mpq_struct [1]> const&) + 472 9 libfilter_mesh_booleans.so 0x000000010c31b3e5 bool CGAL::Filtered_predicate<CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<CGAL::Interval_nt > >, CGAL::Cartesian_converter<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick>, CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> >, CGAL::NT_converter<double, gmp_expr<mpq_struct [1], __mpq_struct [1]> > >, CGAL::Cartesian_converter<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick>, CGAL::Simple_cartesian<CGAL::Interval_nt >, CGAL::NT_converter<double, CGAL::Interval_nt > >, true>::operator()<CGAL::Plane_3, CGAL::Plane_3 >(CGAL::Plane_3 const&, CGAL::Plane_3 const&) const + 393 10 libfilter_mesh_booleans.so 0x000000010c33cddc bool CGAL::Static_filtered_predicate<CGAL::Simple_cartesian<CGAL::Interval_nt >, CGAL::Filtered_predicate<CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::CommonKernelFunctors::Equal_3<CGAL::Simple_cartesian<CGAL::Interval_nt > >, CGAL::Exact_converter<CGAL::Epeck, CGAL::Simple_cartesian<gmp_expr<mpq_struct [1], mpq_struct [1]> > >, CGAL::Approx_converter<CGAL::Epeck, CGAL::Simple_cartesian<CGAL::Interval_nt > >, true>, CGAL::internal::Static_filters_predicates::Equal_3<CGAL::Filtered_kernel_base<CGAL::Type_equality_wrapper<CGAL::Cartesian_base_no_ref_count<double, CGAL::Epick>, CGAL::Epick> > > >::operator()<CGAL::Plane_3, CGAL::Plane_3 >(CGAL::Plane_3 const&, CGAL::Plane_3 const&) const + 278 11 libfilter_mesh_booleans.so 0x000000010c33b8af igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<__gmp_expr<mpq_struct [1], mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::double_shared_vertex(CGAL::Triangle_3 const&, CGAL::Triangle_3 const&, long, long, std::1::vector<std::1::pair<long, long>, std::1::allocator<std::1::pair<long, long> > >) + 109 12 libfilter_mesh_booleans.so 0x000000010c33b502 igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<__gmp_expr<mpq_struct [1], mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::process_intersecting_boxes()::'lambda'(unsigned long, unsigned long)::operator()(unsigned long, unsigned long) const + 1196 13 libfilter_mesh_booleans.so 0x000000010c33b806 void* std::1::thread_proxy<std::1::tuple<std::1::unique_ptr<std::1::thread_struct, std::1::default_delete >, igl::copyleft::cgal::SelfIntersectMesh<CGAL::Epeck, Eigen::Matrix<float, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<CGAL::Lazy_exact_nt<gmp_expr<__mpq_struct [1], mpq_struct [1]> >, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 3, 0, -1, 3>, Eigen::Matrix<int, -1, -1, 0, -1, -1>, Eigen::Matrix<int, -1, 1, 0, -1, 1>, Eigen::Matrix<int, -1, 1, 0, -1, 1> >::process_intersecting_boxes()::'lambda'(unsigned long, unsigned long), unsigned long, unsigned long> >(void*) + 50 14 libsystem_pthread.dylib 0x00007fff7ddb1661 _pthread_body + 340 15 libsystem_pthread.dylib 0x00007fff7ddb150d _pthread_start + 377 16 libsystem_pthread.dylib 0x00007fff7ddb0bf9 thread_start + 13

Thread 5 crashed with X86 Thread State (64-bit): rax: 0x0000000002000209 rbx: 0x0000000000000004 rcx: 0x0000700005987b38 rdx: 0x0000700005987fb0 rdi: 0x0000000000000006 rsi: 0x0000000000000004 rbp: 0x0000700005987b90 rsp: 0x0000700005987b38 r8: 0x0000700005987bb0 r9: 0x0000000000000000 r10: 0x0000000000000085 r11: 0x0000000000000246 r12: 0x0000000000000085 r13: 0x0000700005987fb0 r14: 0x0000000000000006 r15: 0x0000000000000000 rip: 0x00000001099f7256 rfl: 0x0000000000000246 cr2: 0x0000000109a47fe0

Logical CPU: 0 Error Code: 0x02000209 Trap Number: 133

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0x7fff7bd4fff7 libcoretls.dylib (155.50.1) <087E9F90-21E5-376D-9956-C4E346409682> /usr/lib/libcoretls.dylib 0x7fff7bd50000 - 0x7fff7bd51ff3 libcoretls_cfhelpers.dylib (155.50.1) <78CCDD10-7D71-365E-A0A5-8524ED5F5BF9> /usr/lib/libcoretls_cfhelpers.dylib 0x7fff7beea000 - 0x7fff7c07bfff libcrypto.35.dylib (22.50.3) <6E609F99-59BC-3AEA-9DB3-FD360A2C50CC> /usr/lib/libcrypto.35.dylib 0x7fff7c216000 - 0x7fff7c221ff7 libcsfde.dylib (546.50.1) <5A79D6BF-EC0E-32CD-AEA4-93F164683393> /usr/lib/libcsfde.dylib 0x7fff7c222000 - 0x7fff7c277ff3 libcups.2.dylib (462.2.10) <590D6ACC-68A0-371E-8646-FC59F814534B> /usr/lib/libcups.2.dylib 0x7fff7c2a2000 - 0x7fff7c2f6fff libcurl.4.dylib (105.40.2) <5F488A16-AD24-3C06-A0E5-B32D9358ED01> /usr/lib/libcurl.4.dylib 0x7fff7c3b7000 - 0x7fff7c3b7fff libenergytrace.dylib (16) <1F11D488-07C6-3D18-BEF2-0B28A992D761> /usr/lib/libenergytrace.dylib 0x7fff7c3e9000 - 0x7fff7c3edff7 libgermantok.dylib (17) /usr/lib/libgermantok.dylib 0x7fff7c3ee000 - 0x7fff7c3f3ff3 libheimdal-asn1.dylib (520.50.9) /usr/lib/libheimdal-asn1.dylib 0x7fff7c41f000 - 0x7fff7c510ff7 libiconv.2.dylib (51.50.1) <7965B866-C75A-3450-9891-0500349F7090> /usr/lib/libiconv.2.dylib 0x7fff7c511000 - 0x7fff7c738ffb libicucore.A.dylib (59181.0.1) <17767680-09DF-3954-AB6C-B13B41F92A2E> /usr/lib/libicucore.A.dylib 0x7fff7c785000 - 0x7fff7c786fff liblangid.dylib (128) /usr/lib/liblangid.dylib 0x7fff7c787000 - 0x7fff7c7a0ffb liblzma.5.dylib (10) <60BEAB81-CE65-3479-90CC-03325AACEC95> /usr/lib/liblzma.5.dylib 0x7fff7c7a1000 - 0x7fff7c7b7ff7 libmarisa.dylib (9) <47540053-02CF-35F8-A75E-074DB3D51812> /usr/lib/libmarisa.dylib 0x7fff7c7b8000 - 0x7fff7c867fff libmecab.1.0.0.dylib (779.7.6) <9003A13E-FD53-3428-9927-E40575C764C6> /usr/lib/libmecab.1.0.0.dylib 0x7fff7c868000 - 0x7fff7ca90ff7 libmecabra.dylib (779.7.6) /usr/lib/libmecabra.dylib 0x7fff7cc68000 - 0x7fff7cde3fff libnetwork.dylib (1229.70.2) <0596A03E-C984-3FE6-B88E-63D5F96EC49A> /usr/lib/libnetwork.dylib 0x7fff7ce6a000 - 0x7fff7d25b3b7 libobjc.A.dylib (723) <616AB826-9179-3924-AA61-AF760363A3F5> /usr/lib/libobjc.A.dylib 0x7fff7d25c000 - 0x7fff7d25dfff libodfde.dylib (24.50.1) <5BDC9B9B-32BE-3E6F-ADF1-FFC0BA66B22C> /usr/lib/libodfde.dylib 0x7fff7d26e000 - 0x7fff7d272fff libpam.2.dylib (22) /usr/lib/libpam.2.dylib 0x7fff7d275000 - 0x7fff7d2adff7 libpcap.A.dylib (79.20.3) <6A9D27FA-2780-3E96-8B2E-645638AC13AC> /usr/lib/libpcap.A.dylib 0x7fff7d32c000 - 0x7fff7d348ffb libresolv.9.dylib (65.1) /usr/lib/libresolv.9.dylib 0x7fff7d384000 - 0x7fff7d396fff libsasl2.2.dylib (211.0.2) /usr/lib/libsasl2.2.dylib 0x7fff7d397000 - 0x7fff7d398ff3 libspindump.dylib (252) <7BE3801C-F1F5-3F54-AB70-9842F8EF3F09> /usr/lib/libspindump.dylib 0x7fff7d399000 - 0x7fff7d526ff7 libsqlite3.dylib (274.8.1) /usr/lib/libsqlite3.dylib 0x7fff7d582000 - 0x7fff7d5d5ffb libssl.35.dylib (22.50.3) <208CD5D9-F165-3DED-9DE0-BF2B349895E8> /usr/lib/libssl.35.dylib 0x7fff7d6fa000 - 0x7fff7d75aff3 libusrtcp.dylib (1229.70.2) <1E065228-D0E3-3808-9405-894056C6BEC0> /usr/lib/libusrtcp.dylib 0x7fff7d75b000 - 0x7fff7d75effb libutil.dylib (51.20.1) /usr/lib/libutil.dylib 0x7fff7d75f000 - 0x7fff7d76cff3 libxar.1.dylib (417.1) <351781D5-3CCF-320F-BB5A-4DFCC1CCD31D> /usr/lib/libxar.1.dylib 0x7fff7d770000 - 0x7fff7d857ffb libxml2.2.dylib (31.20) <286F8531-7001-3989-9640-284443355433> /usr/lib/libxml2.2.dylib 0x7fff7d858000 - 0x7fff7d880fff libxslt.1.dylib (15.16) <57D56366-1E7B-356C-B2B8-F4688FF666E6> /usr/lib/libxslt.1.dylib 0x7fff7d881000 - 0x7fff7d893ffb libz.1.dylib (70) <47278BDC-596E-3037-B8DA-05FE9D5DBEF6> /usr/lib/libz.1.dylib 0x7fff7d92f000 - 0x7fff7d933ff7 libcache.dylib (80) <096D3699-58D2-3D23-9512-BC88DAE7B16C> /usr/lib/system/libcache.dylib 0x7fff7d934000 - 0x7fff7d93eff3 libcommonCrypto.dylib (60118.50.1) /usr/lib/system/libcommonCrypto.dylib 0x7fff7d93f000 - 0x7fff7d946fff libcompiler_rt.dylib (62) <4CEED002-D00B-35F8-B563-0546A5F71A43> /usr/lib/system/libcompiler_rt.dylib 0x7fff7d947000 - 0x7fff7d950ffb libcopyfile.dylib (146.50.5) /usr/lib/system/libcopyfile.dylib 0x7fff7d951000 - 0x7fff7d9d6ffb libcorecrypto.dylib (562.70.3) <9C6E5CC2-272B-3740-AEDB-9EBEC98EC7F9> /usr/lib/system/libcorecrypto.dylib 0x7fff7da5e000 - 0x7fff7da97ff7 libdispatch.dylib (913.60.3) <285526B6-A2A6-316D-A1CC-37803B71E203> /usr/lib/system/libdispatch.dylib 0x7fff7da98000 - 0x7fff7dab5ff7 libdyld.dylib (551.5) <49ABA86D-DD48-3133-9B14-B9A564EEBC66> /usr/lib/system/libdyld.dylib 0x7fff7dab6000 - 0x7fff7dab6ffb libkeymgr.dylib (28) <7CC7B5E1-AB7F-3495-A26A-396461BCB66B> /usr/lib/system/libkeymgr.dylib 0x7fff7dab7000 - 0x7fff7dac3ff3 libkxld.dylib (4570.71.82.8) <44AF05D7-6BDF-3A9B-B5CF-D16C98B6844E> /usr/lib/system/libkxld.dylib 0x7fff7dac4000 - 0x7fff7dac4ff7 liblaunch.dylib (1205.70.16) <265EE555-E988-3EE5-A39E-028FB3A5FE11> /usr/lib/system/liblaunch.dylib 0x7fff7dac5000 - 0x7fff7dac9ffb libmacho.dylib (906) /usr/lib/system/libmacho.dylib 0x7fff7daca000 - 0x7fff7daccfff libquarantine.dylib (86.70.1) <262CECFE-A493-3EC6-8608-CEA93757265E> /usr/lib/system/libquarantine.dylib 0x7fff7dacd000 - 0x7fff7daceff3 libremovefile.dylib (45) /usr/lib/system/libremovefile.dylib 0x7fff7dacf000 - 0x7fff7dae6fff libsystem_asl.dylib (356.70.1) <9481D82D-CFB7-3032-A07F-88F7F59CAC2C> /usr/lib/system/libsystem_asl.dylib 0x7fff7dae7000 - 0x7fff7dae7fff libsystem_blocks.dylib (67) /usr/lib/system/libsystem_blocks.dylib 0x7fff7dae8000 - 0x7fff7db71ff7 libsystem_c.dylib (1244.50.9) <25DD83D8-80CA-3DFF-8626-FE704911F19C> /usr/lib/system/libsystem_c.dylib 0x7fff7db72000 - 0x7fff7db75ffb libsystem_configuration.dylib (963.50.9) <61B26E1D-FEFF-38C6-AE0E-A6DD90145EB2> /usr/lib/system/libsystem_configuration.dylib 0x7fff7db76000 - 0x7fff7db79ffb libsystem_coreservices.dylib (51) /usr/lib/system/libsystem_coreservices.dylib 0x7fff7db7a000 - 0x7fff7db7bfff libsystem_darwin.dylib (1244.50.9) <6195EEA1-83A7-35F0-8147-5AB031020CD0> /usr/lib/system/libsystem_darwin.dylib 0x7fff7db7c000 - 0x7fff7db82ffb libsystem_dnssd.dylib (878.70.4) <0D2C9583-5D28-375B-AEB4-F66F18C78322> /usr/lib/system/libsystem_dnssd.dylib 0x7fff7db83000 - 0x7fff7dbccff7 libsystem_info.dylib (517.30.1) <9C2C96F3-638B-34E7-A2BD-24C643EAF957> /usr/lib/system/libsystem_info.dylib 0x7fff7dbcd000 - 0x7fff7dbf3ff7 libsystem_kernel.dylib (4570.71.82.8) /usr/lib/system/libsystem_kernel.dylib 0x7fff7dbf4000 - 0x7fff7dc3ffcb libsystem_m.dylib (3147.50.1) /usr/lib/system/libsystem_m.dylib 0x7fff7dc40000 - 0x7fff7dc5fff7 libsystem_malloc.dylib (140.50.7) <821E16C8-7A7E-3269-9167-10F4F413BF93> /usr/lib/system/libsystem_malloc.dylib 0x7fff7dc60000 - 0x7fff7dd90ff7 libsystem_network.dylib (1229.70.2) <07BFD80A-E7EB-3DEB-B765-5E1659453114> /usr/lib/system/libsystem_network.dylib 0x7fff7dd91000 - 0x7fff7dd9bffb libsystem_networkextension.dylib (767.70.2) /usr/lib/system/libsystem_networkextension.dylib 0x7fff7dd9c000 - 0x7fff7dda5ff3 libsystem_notify.dylib (172) <738B3BB0-4F20-3446-A3B6-095D796E5903> /usr/lib/system/libsystem_notify.dylib 0x7fff7dda6000 - 0x7fff7ddadff7 libsystem_platform.dylib (161.50.1) <90A2A62F-8690-3FA7-A4D0-9085BF2FA44A> /usr/lib/system/libsystem_platform.dylib 0x7fff7ddae000 - 0x7fff7ddb9fff libsystem_pthread.dylib (301.50.1) <283E64A7-A2B2-3212-95BA-4D21F9AE36CF> /usr/lib/system/libsystem_pthread.dylib 0x7fff7ddba000 - 0x7fff7ddbdfff libsystem_sandbox.dylib (765.70.2) /usr/lib/system/libsystem_sandbox.dylib 0x7fff7ddbe000 - 0x7fff7ddbfff3 libsystem_secinit.dylib (30) <4E84DF62-57B5-36F9-819F-3C1E7FEDA856> /usr/lib/system/libsystem_secinit.dylib 0x7fff7ddc0000 - 0x7fff7ddc7ff7 libsystem_symptoms.dylib (820.60.3) /usr/lib/system/libsystem_symptoms.dylib 0x7fff7ddc8000 - 0x7fff7dddcff7 libsystem_trace.dylib (829.70.2) <4C4E5351-E370-3226-9B30-61E250DE3B2E> /usr/lib/system/libsystem_trace.dylib 0x7fff7ddde000 - 0x7fff7dde3ff7 libunwind.dylib (35.3) /usr/lib/system/libunwind.dylib 0x7fff7dde4000 - 0x7fff7de11fff libxpc.dylib (1205.70.16) <26D99819-B813-320E-9E8F-9D57AD2DA63B> /usr/lib/system/libxpc.dylib

External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 2595 thread_create: 0 thread_set_state: 0

VM Region Summary: ReadOnly portion of Libraries: Total=469.7M resident=0K(0%) swapped_out_or_unallocated=469.7M(100%) Writable regions: Total=205.2M written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=205.2M(100%)

                            VIRTUAL   REGION 

REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 256K 3 Activity Tracing 256K 2 CG backing stores 20.5M 11 CG image 3052K 23 CoreAnimation 216K 44 CoreGraphics 8K 2 CoreImage 132K 29 CoreUI image data 2856K 32 CoreUI image file 216K 6 Foundation 4K 2 Image IO 64K 2 Kernel Alloc Once 8K 2 MALLOC 166.1M 50 MALLOC guard page 48K 12 Memory Tag 242 12K 2 Memory Tag 251 36K 3 OpenGL GLSL 256K 4 STACK GUARD 56.0M 7 Stack 10.5M 9 VM_ALLOCATE 672K 43 DATA 37.0M 434 DATA_CONST 160K 7 __FONT_DATA 4K 2 GLSLBUILTINS 2588K 2 LINKEDIT 205.3M 167 TEXT 265.0M 428 UNICODE 560K 2 dylib (reserved) 456K 54 reserved VM address space (unallocated) mapped file 325.9M 337 shared memory 716K 18 =========== ======= ======= TOTAL 1.1G 1709 TOTAL, minus reserved VM space 1.1G 1709

Model: iMac10,1, BootROM 215.0.0.0.0, 2 processors, Intel Core 2 Duo, 3.06 GHz, 16 GB, SMC 1.53f13 Graphics: ATI Radeon HD 4670, ATI Radeon HD 4670, PCIe Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1067 MHz, 0x0198, 0x393930353432382D3032302E4130304C4620 Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1067 MHz, 0x0198, 0x393930353432382D3032302E4130304C4620 Memory Module: BANK 0/DIMM1, 4 GB, DDR3, 1067 MHz, 0x0000, 0x4D34373142353237334248312D4346382020 Memory Module: BANK 1/DIMM1, 4 GB, DDR3, 1067 MHz, 0x0000, 0x4D34373142353237334248312D4346382020 AirPort: spairport_wireless_card_type_airport_extreme (0x168C, 0x8F), Atheros 9280: 4.0.74.0-P2P Bluetooth: Version 6.0.7f22, 3 services, 27 devices, 1 incoming serial ports Network Service: Wi-Fi, AirPort, en1 Serial ATA Device: ST4000DX001-1CE168, 4 TB Serial ATA Device: OPTIARC DVD RW AD-5680H USB Device: USB Bus USB Device: IR Receiver USB Device: USB Bus USB Device: BRCM2046 Hub USB Device: Bluetooth USB Host Controller USB Device: USB 2.0 Bus USB Device: Built-in iSight USB Device: Keyboard Hub USB Device: USB Optical Mouse USB Device: Apple Keyboard USB Device: USB 2.0 Bus USB Device: Internal Memory Card Reader Thunderbolt Bus:

alemuntoni commented 2 years ago

It seems that the gmp version released with the macos version github provides to build pymeshlab is incompatible with your system. There is not much I can do here, I am afraid.

If you want, you can try to build pymeshlab in your mac, that will use a gmp version that should be compatible..