Open andreasbueckle opened 3 weeks ago
See https://github.com/cns-iu/hra-glb-download/blob/main/get_organs.py Must work with https://github.com/hubmapconsortium/ccf-grlc
Adapted from @bherr2 : With https://grlc.io/api-git/hubmapconsortium/ccf-grlc/subdir/hra//ref-organ-glb-files.json, you'll get JSON but not in the form you likely want. So, probably best to use CSV. This is the JSON response format (https://www.w3.org/TR/sparql11-results-json/)
Can also use https://apps.humanatlas.io/api/v1/reference-organs Or use https://grlc.io/api-git/hubmapconsortium/ccf-grlc/subdir/hra//ref-organ-glb-files.csv if you want to use csv format
Update: I created: https://github.com/cns-iu/hra-glb-download/blob/main/get_organs_with_hra_api.py
See https://github.com/cns-iu/hra-glb-download/blob/main/get_organs.py Must work with https://github.com/hubmapconsortium/ccf-grlc
Adapted from @bherr2 : With https://grlc.io/api-git/hubmapconsortium/ccf-grlc/subdir/hra//ref-organ-glb-files.json, you'll get JSON but not in the form you likely want. So, probably best to use CSV. This is the JSON response format (https://www.w3.org/TR/sparql11-results-json/)
Can also use https://apps.humanatlas.io/api/v1/reference-organs Or use https://grlc.io/api-git/hubmapconsortium/ccf-grlc/subdir/hra//ref-organ-glb-files.csv if you want to use csv format