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codercahol / chlamy-ImPi

An image processing pipeline for time-series of Chlamydomonas reinhardtii fluorescence photos
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reprocess parquet df into a useful timeseries for analysis #23

Open codercahol opened 7 months ago

codercahol commented 7 months ago

for the purpose of saving the data to disk, the parquet is saved as

unique ID time 1 ... time n measurement 1 ... measurement n
A [np.datetime64] ... [np.datetime64] # ... #
B [np.datetime64] ... [np.datetime64] # ... #

want to have it reformatted as:

time (elapsed seconds since experiment start) sample ID measurement 1 ... measurement n
# * # ... #
# * # ... #