cogent3 / Cogent3Workshop

Materials for the Phylomania workshop
BSD 3-Clause "New" or "Revised" License
8 stars 4 forks source link

docker image extras #10

Open GavinHuttley opened 11 months ago

GavinHuttley commented 11 months ago

Plus add more details on the docker command (local directory is the absolute path)

khiron commented 11 months ago

getting users to run the container using ${PWD}\docker\workspace in a VS Code terminal session resolves the absolute directory issue and the OS path differences

khiron commented 11 months ago

I have added a default virtual environment c3workshop

I have added .vscode settings to prevent jupyter from using python environments that are not virtual environments (ie: the default debian python in /bin that is installed with root access) so notebooks automatically detect C3workshop and any others the user decides to create (but not the python installed with root access).