Identify the types of clinical data fields for the django team

cognoma / cancer-data

TCGA data acquisition and processing for Project Cognoma

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Identify the types of clinical data fields for the django team #13

Open cgreene opened 7 years ago

cgreene commented 7 years ago

There are a number of questions around how best to represent various items that are important for sample selection. Can someone help out the django-cognoma team to specify the best way to put these into the database that the front end can access?

See https://github.com/cognoma/django-cognoma/issues/2

dhimmel commented 7 years ago

Okay we have an open task (#10) to process the clinical matrix dataset. We won't be able to provide much more information to the django team until we make progress on that task.

dhimmel commented 7 years ago

The sample attribute information is now available in data/samples.tsv. The frontend is probably interested in every variable besides maybe patient_id.