cognoma machine-learning issues

cognoma / machine-learning

Machine learning for Project Cognoma

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Remove cognoml package

#65 dhimmel closed 7 years ago
1
Should cognoml reside in a separate repo?

#64 dhimmel closed 7 years ago
5
Cross validation evaluation

#63 gwaybio closed 7 years ago
4
Improve pip installation

#62 dhimmel closed 7 years ago
11
Add stronger support for pip

#61 jessept closed 7 years ago
2
Simplify converting objects to JSON serializable formats.

#60 dhimmel closed 7 years ago
1
Defining features and labels

#59 brankaj opened 7 years ago
5
cognoml tests

#58 awm33 closed 6 years ago
1
Fix cognoml package

#57 awm33 closed 7 years ago
7
Selecting the elastic net mixing parameter

#56 dhimmel closed 7 years ago
5
Literature review

#55 brankaj opened 8 years ago
5
Fix cross-validation/grid search/pipeline setup

#54 dhimmel closed 8 years ago
1
Upgrades: sklearn to 0.18.0, data to v5

#53 dhimmel closed 8 years ago
5
Classifier results for different genes

#52 brankaj closed 8 years ago
5
Create the cognoml package to implement an MVP API

#51 dhimmel closed 7 years ago
3
Adding Factor Analysis

#50 beelze-b closed 8 years ago
4
Linear Discriminant Analysis

#49 htcai closed 8 years ago
7
Cognoma feature selection using PCA (2000 features)

#48 mans2singh closed 8 years ago
3
Evaluate performance of covariates at predicting various mutations

#47 dhimmel closed 8 years ago
3
First attempt at processing covariate information.

#46 stephenshank closed 8 years ago
12
Add update instructions for conda environment

#45 dhimmel closed 8 years ago
2
Decisions required to reach a minimum viable product

#44 dhimmel opened 8 years ago
6
Integrating dimensionality reduction into the pipeline

#43 htcai closed 6 years ago
18
Automate cancer-data download from figshare

#42 dhimmel closed 8 years ago
3
K Nearest Neighbor

#41 yigalron closed 7 years ago
11
Finished AdaBoost classifier

#40 beelze-b closed 8 years ago
6
Machine Learning Pathway Classifier Example

#39 gwaybio closed 8 years ago
10
Memory error

#38 VijYadav closed 8 years ago
7
BernoulliRBM with LogisticRegressionCV

#37 yl565 closed 7 years ago
8
Cognoma ml - RandomForestClassifer - For review/advice

#36 mans2singh closed 8 years ago
20
SVC with rbf kernel

#35 htcai closed 8 years ago
13
Move notebook file introduced by #32

#34 dhimmel closed 8 years ago
2
LinearSVC: added more evaluation metrics

#33 htcai closed 8 years ago
6
Create LassoCV-brankaj.py

#32 brankaj closed 8 years ago
9
ML module API

#31 maxdml closed 6 years ago
31
LinearSVC

#30 htcai closed 8 years ago
9
Do not track TCGA data downloads

#29 dhimmel closed 8 years ago
0
Create a template and directory for algorithms

#28 dhimmel closed 8 years ago
3
Claim an sklearn algorithm to implement and troubleshoot

#27 dhimmel opened 8 years ago
21
Remove executable flags for text files

#26 dhimmel closed 8 years ago
4
Using pipeline in the TCGA-MLexample, add feature selection

#25 yl565 closed 8 years ago
11
Using incremental(on-line) learning to reduce memory cost

#24 yl565 closed 8 years ago
1
Should testing data be used for unsupervised feature tranformation or selection

#23 dhimmel closed 6 years ago
2
Median absolute deviation feature selection

#22 dhimmel opened 8 years ago
4
What covariates should we include as features?

#21 dhimmel opened 8 years ago
6
Preventing overfitting when evaluating many hyperparameters

#20 dhimmel opened 8 years ago
2
Check out this project: TPOT Data Science Assistant

#19 Suberri closed 8 years ago
4
Use grid_search in notebook and add visualization

#18 dhimmel closed 8 years ago
13
Ignore Jupyter notebook checkpoints

#17 dhimmel closed 8 years ago
1
Export notebook to .py file for easy diff viewing

#16 dhimmel closed 8 years ago
4

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