cole-trapnell-lab / cufflinks

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installation error cufflinks #100

Open hemantgujar opened 6 years ago

hemantgujar commented 6 years ago

]$ make make all-recursive make[1]: Entering directory /auto/rcf-proj2/hg1/software/cufflinks-2.2.1' Making all in src make[2]: Entering directory/auto/rcf-proj2/hg1/software/cufflinks-2.2.1/src' if g++ -DHAVE_CONFIG_H -I. -I. -I.. -I../src -I/usr/include -Wall -Wno-strict-aliasing -g -gdwarf-2 -Wunused -Wuninitialized -ftemplate-depth-1024 -m64 -O3 -DNDEBUG -pthread -I/home/rcf-proj2/hg1/software/boost_1_66_0//include -I/auto/rcf-proj2/hg1/software/samtools-1.7//include -I/home/rcf-proj2/hg1/software/eigen/Eigen//include -MT clustering.o -MD -MP -MF ".deps/clustering.Tpo" -c -o clustering.o clustering.cpp; \ then mv -f ".deps/clustering.Tpo" ".deps/clustering.Po"; else rm -f ".deps/clustering.Tpo"; exit 1; fi In file included from clustering.h:38:0, from clustering.cpp:10: abundances.h:21:23: fatal error: Eigen/Dense: No such file or directory

include <Eigen/Dense>

                   ^

compilation terminated. make[2]: [clustering.o] Error 1 make[2]: Leaving directory `/auto/rcf-proj2/hg1/software/cufflinks-2.2.1/src' make[1]: [all-recursive] Error 1 make[1]: Leaving directory `/auto/rcf-proj2/hg1/software/cufflinks-2.2.1' make: *** [all] Error 2