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cole-trapnell-lab / cufflinks

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Cuffdiff 2 #34

Closed bioinfolabmu closed 9 years ago

bioinfolabmu commented 9 years ago

In your Nature Biotechnology paper, 2013 31(1):46-53, you have described Cuffdiff 2.

I already obtained SAM files after aligning RNA-Seq reads to the reference genome. I only need to use Cuffdiff 2 to conduct the downstream analysis. Where can I download the codes for Cuffdiff 2, as described in this paper? Thank you for clarification.

ctrapnell commented 9 years ago

Please post this kind of questions to https://groups.google.com/forum/#!forum/tuxedo-tools-users, not here.