Hello All,
Cufflinks is not recognizing the option --library-norm-method while finding the transcript abundance.
while using it on the following command line
cufflinks --num-threads 10 --quiet --no-update-check --max-bundle-frags 2000000 --library-type fr-unstranded --frag-bias-correct --library-norm-method /human_genome37.fa --multi-read-correct --GTF-guide /ref-transcripts.gtf --output-dir BM_CR_pat_4.txt BM_CR_pat_4.bam
and its throwing following error,
Error: file/directory --library-norm-method does not exist!
Hello All, Cufflinks is not recognizing the option --library-norm-method while finding the transcript abundance. while using it on the following command line
cufflinks --num-threads 10 --quiet --no-update-check --max-bundle-frags 2000000 --library-type fr-unstranded --frag-bias-correct --library-norm-method /human_genome37.fa --multi-read-correct --GTF-guide /ref-transcripts.gtf --output-dir BM_CR_pat_4.txt BM_CR_pat_4.bam and its throwing following error,
Error: file/directory --library-norm-method does not exist!