cole-trapnell-lab / monocle-release

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View(cds)Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. #510

Open peibana opened 3 months ago

peibana commented 3 months ago

package.version("igraph")=2.0.3 package.version("monocle")=2.28.0 When I try to view the object created by newCellDataSet in monocle, it keeps throwing an error: Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. What happened?

liang-78 commented 3 months ago

package.version("igraph")=2.0.3 package.version("monocle")=2.28.0 When I try to view the object created by newCellDataSet in monocle, it keeps throwing an error: Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. What happened?

Hello, have you solved this problem? When I create new object with monocle2, this problem also occurred, and I can't find ideas to solve it.Could you give me some suggestions?

Sujianbang commented 2 months ago

Hello, have you been able to solve this problem? I also meet this problem and I can't find ideas to solve it.

liang-78 commented 2 months ago

Actually this problem tips also occur, but it doesn't the effect to manipulate  monocle object and series operations, you can have a try.

------------------ 原始邮件 ------------------ 发件人: "cole-trapnell-lab/monocle-release" @.>; 发送时间: 2024年6月8日(星期六) 晚上8:33 @.>; @.**@.>; 主题: Re: [cole-trapnell-lab/monocle-release] View(cds)Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. (Issue #510)

Hello, have you been able to solve this problem? I also meet this problem and I can't find ideas to solve it.

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qxmdd commented 1 month ago

Have you solved the problem yet? I also meet this problem and I can't find ideas to solve it.

Sujianbang commented 1 month ago

Actually I ignore this error and just go to next step, it seems no effect on my result.

苏健邦

@. | ---- Replied Message ---- | From | @.> | | Date | 7/1/2024 22:27 | | To | @.> | | Cc | @.>, @.***> | | Subject | Re: [cole-trapnell-lab/monocle-release] View(cds)Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. (Issue #510) |

Have you solved the problem yet? I also meet this problem and I can't find ideas to solve it.

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qxmdd commented 1 month ago

Thank you very much! This problem bothered me for two days!

------------------ Original ------------------ From: Sujianbang @.> Date: Mon,Jul 1,2024 10:37 PM To: cole-trapnell-lab/monocle-release @.> Cc: qxmdd @.>, Comment @.> Subject: Re: [cole-trapnell-lab/monocle-release] View(cds)Error inwarn_version(graph) : This graph was created by a now unsupported oldigraph version. Call upgrade_graph() before using igraph functions on thatobject. (Issue #510)

Actually I ignore this error and just go to next step, it seems no effect on my result.

苏健邦

@. | ---- Replied Message ---- | From | @.> | | Date | 7/1/2024 22:27 | | To | @.> | | Cc | @.>, @.***> | | Subject | Re: [cole-trapnell-lab/monocle-release] View(cds)Error in warn_version(graph) : This graph was created by a now unsupported old igraph version. Call upgrade_graph() before using igraph functions on that object. (Issue #510) |

Have you solved the problem yet? I also meet this problem and I can't find ideas to solve it.

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you commented.Message ID: @.> — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you commented.Message ID: @.>