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cole-trapnell-lab / monocle-release

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Provide an efficient means of extracting model coefficients #7

Open ctrapnell opened 8 years ago

ctrapnell commented 8 years ago

fitModel() Can currently be used to generate full VGAM model objects for each gene in the CellDataSet, but these can be large, so collecting them all in order to extract coefficients can be onerous. We should wrap fit_model_helper() to pull out the coefficients (and their significance scores) and return it as a dataframe for easy plotting.

mebbert commented 7 years ago

Hi,

I'm curious if you have any updates on this. Thanks!