Install monocle (error)

[July233]

Error: package or namespace load failed for 'monocle': .onLoad failed in loadNamespace() for 'rgl', details: call: NULL error: Loading rgl's DLL failed.

I install by http://cole-trapnell-lab.github.io/monocle-release/monocle3/#installing-monocle-3.

sessionInfo(): R version 3.6.3 (2020-02-29) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18363)

Matrix products: default

locale: [1] LC_COLLATE=Chinese (Simplified)_China.936 LC_CTYPE=Chinese (Simplified)_China.936
[3] LC_MONETARY=Chinese (Simplified)_China.936 LC_NUMERIC=C
[5] LC_TIME=Chinese (Simplified)_China.936

attached base packages: [1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached): [1] ChIPseeker_1.22.1 fastmatch_1.1-0
[3] VGAM_1.1-4 BiocFileCache_1.10.2
[5] plyr_1.8.6 igraph_1.2.6
[7] splines_3.6.3 densityClust_0.3
[9] BiocParallel_1.20.1 scater_1.14.0
[11] usethis_1.6.3 GenomeInfoDb_1.22.1
[13] ggplot2_3.3.2 urltools_1.7.3
[15] digest_0.6.27 GOSemSim_2.12.1
[17] viridis_0.5.1 GO.db_3.10.0
[19] fansi_0.4.1 magrittr_2.0.1
[21] memoise_1.1.0 limma_3.42.2
[23] remotes_2.2.0 Biostrings_2.54.0
[25] graphlayouts_0.7.1 matrixStats_0.57.0
[27] askpass_1.1 enrichplot_1.6.1
[29] prettyunits_1.1.1 colorspace_2.0-0
[31] blob_1.2.1 rappdirs_0.3.1
[33] ggrepel_0.8.2 dplyr_1.0.2
[35] callr_3.5.1 crayon_1.3.4
[37] RCurl_1.98-1.2 jsonlite_1.7.1
[39] TxDb.Hsapiens.UCSC.hg19.knownGene_3.2.2 glue_1.4.2
[41] polyclip_1.10-0 gtable_0.3.0
[43] zlibbioc_1.32.0 XVector_0.26.0
[45] DelayedArray_0.12.3 BiocSingular_1.2.2
[47] pkgbuild_1.1.0 SingleCellExperiment_1.8.0
[49] BiocGenerics_0.32.0 scales_1.1.1
[51] DOSE_3.12.0 DBI_1.1.0
[53] Rcpp_1.0.5 plotrix_3.7-8
[55] viridisLite_0.3.0 progress_1.2.2
[57] reticulate_1.18 gridGraphics_0.5-0
[59] rsvd_1.0.3 bit_4.0.4
[61] europepmc_0.4 stats4_3.6.3
[63] httr_1.4.2 fgsea_1.12.0
[65] FNN_1.1.3 gplots_3.1.1
[67] RColorBrewer_1.1-2 ellipsis_0.3.1
[69] pkgconfig_2.0.3 XML_3.99-0.3
[71] farver_2.0.3 dbplyr_2.0.0
[73] ggplotify_0.0.5 tidyselect_1.1.0
[75] rlang_0.4.9 reshape2_1.4.4
[77] AnnotationDbi_1.48.0 munsell_0.5.0
[79] tools_3.6.3 cli_2.2.0
[81] generics_0.1.0 RSQLite_2.2.1
[83] devtools_2.3.2 ggridges_0.5.2
[85] stringr_1.4.0 processx_3.4.5
[87] bit64_4.0.5 fs_1.5.0
[89] tidygraph_1.2.0 caTools_1.18.0
[91] RANN_2.6.1 purrr_0.3.4
[93] ggraph_2.0.4 DO.db_2.9
[95] xml2_1.3.2 biomaRt_2.42.1
[97] compiler_3.6.3 rstudioapi_0.13
[99] beeswarm_0.2.3 curl_4.3
[101] testthat_3.0.0 tibble_3.0.4
[103] tweenr_1.0.1 stringi_1.5.3
[105] ps_1.4.0 GenomicFeatures_1.38.2
[107] desc_1.2.0 lattice_0.20-38
[109] Matrix_1.2-18 vctrs_0.3.5
[111] pillar_1.4.7 lifecycle_0.2.0
[113] BiocManager_1.30.10 triebeard_0.3.0
[115] BiocNeighbors_1.4.2 irlba_2.3.3
[117] data.table_1.13.2 cowplot_1.1.0
[119] bitops_1.0-6 rtracklayer_1.46.0
[121] GenomicRanges_1.38.0 qvalue_2.18.0
[123] R6_2.5.0 KernSmooth_2.23-18
[125] gridExtra_2.3 vipor_0.4.5
[127] IRanges_2.20.2 sessioninfo_1.1.1
[129] boot_1.3-25 MASS_7.3-53
[131] gtools_3.8.2 assertthat_0.2.1
[133] pkgload_1.1.0 SummarizedExperiment_1.16.1
[135] openssl_1.4.3 rprojroot_2.0.2
[137] withr_2.3.0 GenomicAlignments_1.22.1
[139] Rsamtools_2.2.3 S4Vectors_0.24.4
[141] GenomeInfoDbData_1.2.2 parallel_3.6.3
[143] hms_0.5.3 grid_3.6.3
[145] tidyr_1.1.2 DelayedMatrixStats_1.8.0
[147] rvcheck_0.1.8 Rtsne_0.15
[149] ggforce_0.3.2 Biobase_2.46.0
[151] ggbeeswarm_0.6.0

[brgew]

Hi,

The error message suggests that the R package 'rgl' needs to be installed. Try running the command

install.packages('rgl')

in R.

[brgew]

Is this issue resolved?