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collaborativebioinformatics / STRdust

MIT License
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Create phased BAM #4

Closed wdecoster closed 3 years ago

wdecoster commented 3 years ago

Using minimap2 for alignment and longshot for phasing

Depends on https://github.com/collaborativebioinformatics/STR_Integration/issues/3

lfpaulin commented 3 years ago

Data is ready for humans, and on the way for tomato (18:51 UTC) For human is done with and without softclip option in minimap2