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collinarnett / protein_gan

Implementation of "Generative Modeling for Protein Structures" by Namrata Anand and Po-Ssu Huang
GNU General Public License v3.0
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Question about Distance Map #24

Closed hhuang-code closed 2 years ago

hhuang-code commented 2 years ago

Hi Collin,

Thanks for your implementation of the GAN for protein generation!

I have a question regarding the distance map in the data_generation.ipynb: answer[row, col] = residue_one["CA"] - residue_two["CA"]

My personal understanding is: answer[row, col] = norm(residue_one["CA"] - residue_two["CA"])

I'm not sure which one is correct... Could you kindly look into this? Thank you!

collinarnett commented 2 years ago

I haven't worked on this repository in two years. I you want to look into this feel free; however I have moved on to other projects.