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colomemaria / epiAneufinder

R package to detect breakpoints and assign somies to scATAC-seq data
GNU General Public License v3.0
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Problem about processing cores #3

Open Larrycpan opened 2 years ago

Larrycpan commented 2 years ago

Thanks for the tool. It seems that the 'ncores' is set for the physical core, instead of logical core. There are only two physical cores in our server. Could this be fixed by adding another parameter, such as threads?

thek71 commented 1 year ago

Hi, sorry for the late reply. For the moment our algorithm only supports multiple core usage. In the future we will try to add multi-threading for logical cores, although this requires specific R installations that we haven't benchmarked. Thank you for your suggestion.

Best regards, Katia