'nb_features' and 'n_features', what is the difference?

colomemaria / epiScanpy

Episcanpy: Epigenomics Single Cell Analysis in Python

BSD 3-Clause "New" or "Revised" License

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'nb_features' and 'n_features', what is the difference? #47

Closed kridsadakorn closed 4 years ago

kridsadakorn commented 4 years ago

Screen Shot 2019-11-07 at 16 13 14

To follow up after the hackathon, some participants found that after epi.pp.coverage_cells and epi.pp.filter_cells, there were 'nb_features' and 'n_features' added to AnnData. What is the difference?

DaneseAnna commented 4 years ago

It correspond to the same measurement calculated in 2 different questions. The label was uniformded to nb_features only.