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colomemaria / epiScanpy

Episcanpy: Epigenomics Single Cell Analysis in Python
BSD 3-Clause "New" or "Revised" License
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import Error #77

Closed farnoush-shh closed 3 years ago

farnoush-shh commented 3 years ago

Hi! problem with importing episcanpy.api:

import episcanpy.api as epi

ModuleNotFoundError Traceback (most recent call last)

in ----> 1 import episcanpy.api as epi c:\users\49176\anaconda3\envs\atac\lib\site-packages\episcanpy\api\__init__.py in 8 from . import pp 9 from . import tl ---> 10 from . import ct 11 from . import pl 12 c:\users\49176\anaconda3\envs\atac\lib\site-packages\episcanpy\api\ct.py in 4 from ..count_matrix._atac_mtx import bld_atac_mtx, save_sparse_mtx 5 from ..count_matrix._load_met_ct_mtx import load_met_noimput ----> 6 from ..count_matrix._bld_atac_mtx2 import bld_mtx_fly ModuleNotFoundError: No module named 'episcanpy.count_matrix._bld_atac_mtx2' there is no _mtx2 file and when I removed it manually I got another error for importing bld_mtx_fly! Would yo please check. I am using the latest version..
DaneseAnna commented 3 years ago

Hi, sorry ! We forgot to update the tutorials. Now you just need: import episcanpy as epi

farnoush-shh commented 3 years ago

solved! thanks