For QC of single-nucleus RNA-sequencing, only need to look for outliers
in the higher tail of mitochondrial counts, as good quality nuclei
should not contain any mitochondrial transcripts. Thus, added an
option to allow users to specify this in annotate_sce().
Resolves https://github.com/combiz/scFlow/issues/187
For QC of single-nucleus RNA-sequencing, only need to look for outliers in the higher tail of mitochondrial counts, as good quality nuclei should not contain any mitochondrial transcripts. Thus, added an option to allow users to specify this in
annotate_sce(). Resolves https://github.com/combiz/scFlow/issues/187