S259QC script error - Githubissues

commfish / GCLr

Gene Conservation Lab R package repository

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S259QC script error #63

Closed Jodiestrada closed 10 months ago

Jodiestrada commented 10 months ago

Tela and I were running through the S259QC script and it errored at line 483 today, on Wednesday it errored at line 584. Not sure what's going on but here's a screenshot of the error from today:

qcscript_error

The script is here: S:\GCL\Lab\Genotyping\SNP Projects\Sockeye\Project S259 SEAK Districts 6_8_11 2023\QC

krshedd commented 10 months ago

Weird, I haven't been able to replicate your issue on this QC, but I think I've found a different bug with dupcheck_qc_conflicts, I do not think that project and QC fish that were removed due to remove_ind_miss_loci were properly being screened out.