Closed denis-yuen closed 8 years ago
cwltool --update does not seem to accept draft-3 as a valid version (and it only updates as far as dev4) which is odd because it seems like it should https://github.com/common-workflow-language/cwltool/blob/master/cwltool/schemas/draft-3/Process.yml#L31
cwltool --update
draft-3
ex:
dyuen@orz:~/dockstore/dockstore-launcher$ cat test.cwl #!/usr/bin/env cwl-runner class: CommandLineTool description: "Markdown description text here" id: "HelloWorld" label: "HelloWorld Tool" cwlVersion: "cwl:draft-3.dev1" dyuen@orz:~/dockstore/dockstore-launcher$ cwltool --non-strict --update test.cwl /usr/local/bin/cwltool 1.0.20160108200940 { "cwlVersion": "https://w3id.org/cwl/cwl#draft-3.dev4", "requirements": [ { "class": "InlineJavascriptRequirement" } ], "description": "Markdown description text here", "id": "HelloWorld", "label": "HelloWorld Tool", "class": "CommandLineTool", "name": "file:///home/dyuen/dockstore/dockstore-launcher/test.cwl" } dyuen@orz:~/dockstore/dockstore-launcher$ vim test.cwl dyuen@orz:~/dockstore/dockstore-launcher$ cat test.cwl #!/usr/bin/env cwl-runner class: CommandLineTool description: "Markdown description text here" id: "HelloWorld" label: "HelloWorld Tool" cwlVersion: "cwl:draft-3" dyuen@orz:~/dockstore/dockstore-launcher$ cwltool --non-strict --update test.cwl /usr/local/bin/cwltool 1.0.20160108200940 I'm sorry, I couldn't load this CWL file. Unrecognized version https://w3id.org/cwl/cwl#draft-3 dyuen@orz:~/dockstore/dockstore-launcher$
Versions of stuff:
dyuen@orz:~/dockstore/dockstore-launcher$ pip list | grep cwl cwl-runner (1.0) cwltool (1.0.20160108200940) dyuen@orz:~/dockstore/dockstore-launcher$ sudo pip install cwltool --upgrade ... Requirement already up-to-date: cwltool in /usr/local/lib/python2.7/dist-packages
This is related to https://github.com/common-workflow-language/schema_salad/issues/7 (sorry)
Looks like this works now so I'm going to close this issue.
cwltool --update
does not seem to acceptdraft-3
as a valid version (and it only updates as far as dev4) which is odd because it seems like it should https://github.com/common-workflow-language/cwltool/blob/master/cwltool/schemas/draft-3/Process.yml#L31ex:
Versions of stuff:
This is related to https://github.com/common-workflow-language/schema_salad/issues/7 (sorry)