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Wiener Filter Tuning #47

Closed thisFreya closed 2 years ago

thisFreya commented 2 years ago

See #17

Followed https://doi.org/10.1016/j.jsb.2011.06.010.

This involved using the spectral signal-to-noise ratio (SSNR) to tune the wiener filter based on the projections and ctfs inputted into the system.

Also included are expanding the expand_1d_to_3d and binary_mask_3d methods to work with 2d as well, as this was useful when computing the SSNR.

codecov[bot] commented 2 years ago

Codecov Report

Merging #47 (1721bf7) into dev (20f1071) will not change coverage. The diff coverage is 100.00%.

@@            Coverage Diff            @@
##               dev       #47   +/-   ##
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  Coverage   100.00%   100.00%           
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  Files            1         1           
  Lines          185       228   +43     
=========================================
+ Hits           185       228   +43
Impacted Files Coverage Δ
...I/iterative_refinement/expectation_maximization.py 100.00% <100.00%> (ø)

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