compbio-UofT / medsavant

MedSavant is a search engine for genetic variants
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In annotation-formatter, warn if duplicate column names #286

Open jvlasblom opened 10 years ago

jvlasblom commented 10 years ago

Spit out a warning if the outputted XML file has duplicate column names. (<field name="..." ... />)

Though the tool tries to guess meaningful column names based on truncating the first N characters of the tabix file header, sometimes this results in duplicates.