Open kylepalos opened 9 months ago
Sorry for the late reply. The source code for the function RunGSEA_plant has been modified to rectify these errors. If you prefer not to reinstall the scPlant package, consider the following alternative: early1@misc$GSEAresult_GO <- early1@misc$GSEAresult_customized Running the code above before proceeding to the functional annotation vignette may help to avoid these errors.
Hi,
Thanks for creating a really nice plant-focused package. I am working with Maize scRNA data in the Pre-processing and Functional annotation vignettes as follows:
The above code all completed successfully, and I can find the various objects generated in the
slots
However, when trying to proceed in the functional annotation vignette, I get errors with all of the following functions:
These seem to be Dplyr errors based on not having a valid data frame object to work on. Am I doing something incorrect?
Thank you very much for your help.