compbiol / CAMSA

CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
MIT License
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Converter from assembly points to DOT decribing SAG #4

Closed aganezov closed 7 years ago

aganezov commented 8 years ago

Add an automatic converter, that takes as an input a set of files containing assembly points in CAMSA format and outputs a DOT formatted file, describing the SAG subgraph, obtained from the corresponding assembly points. Usage of bg package is possible, but if can be obtained simpler, shall exclude dependency additions.

Proposed signature:

camsa2dot.py PAIRS [PAIRS ...]