compbiomed / singleCellTK

Interactively analyze single cell genomic data
https://camplab.net/sctk/
Other
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Devel #725

Closed joshua-d-campbell closed 11 months ago

codecov[bot] commented 11 months ago

Codecov Report

Attention: 136 lines in your changes are missing coverage. Please review.

Comparison is base (150cee2) 52.80% compared to head (819903d) 52.72%. Report is 26 commits behind head on devel.

:exclamation: Current head 819903d differs from pull request most recent head f5554fb. Consider uploading reports for the commit f5554fb to get more accurate results

Additional details and impacted files ```diff @@ Coverage Diff @@ ## devel #725 +/- ## ========================================== - Coverage 52.80% 52.72% -0.08% ========================================== Files 79 79 Lines 12679 12703 +24 ========================================== + Hits 6695 6698 +3 - Misses 5984 6005 +21 ``` | [Files](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed) | Coverage Δ | | |---|---|---| | [R/doubletFinder\_doubletDetection.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9kb3VibGV0RmluZGVyX2RvdWJsZXREZXRlY3Rpb24uUg==) | `76.68% <100.00%> (ø)` | | | [R/miscFunctions.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9taXNjRnVuY3Rpb25zLlI=) | `47.29% <ø> (-1.98%)` | :arrow_down: | | [R/runCluster.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9ydW5DbHVzdGVyLlI=) | `80.58% <100.00%> (ø)` | | | [R/runTSNE.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9ydW5UU05FLlI=) | `78.26% <100.00%> (ø)` | | | [R/runUMAP.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9ydW5VTUFQLlI=) | `81.53% <100.00%> (ø)` | | | [R/scDblFinder\_doubletDetection.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9zY0RibEZpbmRlcl9kb3VibGV0RGV0ZWN0aW9uLlI=) | `80.95% <100.00%> (ø)` | | | [R/scater\_PCA.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9zY2F0ZXJfUENBLlI=) | `100.00% <100.00%> (ø)` | | | [R/scds\_doubletdetection.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9zY2RzX2RvdWJsZXRkZXRlY3Rpb24uUg==) | `84.93% <100.00%> (ø)` | | | [R/seuratFunctions.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9zZXVyYXRGdW5jdGlvbnMuUg==) | `73.30% <100.00%> (+0.09%)` | :arrow_up: | | [R/importSTARSolo.R](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed#diff-Ui9pbXBvcnRTVEFSU29sby5S) | `89.88% <75.00%> (-1.68%)` | :arrow_down: | | ... and [4 more](https://app.codecov.io/gh/compbiomed/singleCellTK/pull/725?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compbiomed) | |

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