I would like to install micca on our cluster.
we already have all the requirement tools (swarm, muscle, VSearch, etc...) installed and available.
unfortunatly micca have hardcoded path for those tools.
why vsearch, fasttree, swarm and muscle have hardcoded path while cutadapt and rdp are searched externaly ?
can you please provide an installation method that will allow us to use already installed tools.
or just use simple system calls that relies on the user path to run muscle, vsearch, ...
Hello,
I would like to install micca on our cluster. we already have all the requirement tools (swarm, muscle, VSearch, etc...) installed and available.
unfortunatly micca have hardcoded path for those tools.
why vsearch, fasttree, swarm and muscle have hardcoded path while cutadapt and rdp are searched externaly ?
can you please provide an installation method that will allow us to use already installed tools. or just use simple system calls that relies on the user path to run muscle, vsearch, ...
regards
Eric