DeepLC as a docker image

compomics / DeepLC

DeepLC: Retention time prediction for (modified) peptides using Deep Learning.

https://iomics.ugent.be/deeplc

Apache License 2.0

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DeepLC as a docker image #16

Closed MarcIsak closed 3 years ago

MarcIsak commented 3 years ago

Hi,

I just wonder if there's a plan to distribute a Docker image of DeepLC later? Btw, I think this tool is performing really well given the benchmarks that I have done between predicted vs. experimental RT and iRTs.

Best,

Marc

RalfG commented 3 years ago

Hi Marc, Glad DeepLC is working well for you! As DeepLC is in bioconda, there's already a Docker image available: https://quay.io/repository/biocontainers/deeplc

MarcIsak commented 3 years ago

Hi Ralf,

my bad! Initially I did not manage to pull the image as I did not provide any tag ( default tag: latest, did not work). But I found one of the valid tags and managed to pull the image. The application works nicely so thank you!

Marc