Closed caetera closed 2 years ago
Dear caetera,
That does seem like a mistake. I can have a look at this tomorrow. In the meantime, feel free to open a PR.
Thank you for noticing!
Kind regards,
Robbin
PR created #41
Great! PR merged. Will release a new version soon.
Solved in #41 , please see v1.0.1
Hello,
I have noticed, that when selecting one of the default models (i.e.
--file_model
is not provided) the last one in the list is selected as the best one independently of the performance. Here is a piece of debug log (I have included the model name in the output):Although the performance of
full_hc_hela_hf_psms_aligned
is better, the last one in the list is selected.Most likely, the error is this line https://github.com/compomics/DeepLC/blob/18fb8c39e0f80576dee0c1ecff0b6738968f2692/deeplc/deeplc.py#L1194 I believe it should be
m_group_name = m_name
Since, I am not very sure that I understand everything correctly, I prefer to open the issue before PR.
The issue was observed with versions 0.1.36 and 1.0.0 (the latest in pip)