error java.lang.NullPointerException

I tested the MPA with the the demo .fasta and the .mgf files according to the publiation of Schiebenhöfer et al. 2020 ... but I receive the following error message:

Severe Error Message: java.lang.NullPointerException Level: SEVERE Stack Trace: null de.mpa.db.mysql.accessor.ProjectTableAccessor.findAllProjects(ProjectTableAccessor.java:395) de.mpa.db.mysql.ProjectManager.getProjects(ProjectManager.java:429) de.mpa.client.ui.projectpanel.ProjectPanel.refreshProjectTable(ProjectPanel.java:815) de.mpa.client.ui.projectpanel.ProjectPanel.(ProjectPanel.java:150) de.mpa.client.ui.ClientFrame.initComponents(ClientFrame.java:293) de.mpa.client.ui.ClientFrame.(ClientFrame.java:178) de.mpa.client.ui.ClientFrame.getInstance(ClientFrame.java:138) de.mpa.client.ui.ClientFrame.restart(ClientFrame.java:146) de.mpa.client.ui.inputpanel.SettingsPanel$BatchProcessWorker.doInBackground(SettingsPanel.java:506) javax.swing.SwingWorker$1.call(Unknown Source) java.util.concurrent.FutureTask.run(Unknown Source) javax.swing.SwingWorker.run(Unknown Source) java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) java.lang.Thread.run(Unknown Source)

I activated the MPA MySQL Service manually and restarted the computer but the program still fails...

What can I do?

All the best, Anke

Dear Anke,

if I like we can help you with your issues? Therefore, I would propose to zoom or to skype?

regards

Robert

----- On Jul 8, 2021, at 8:30 AM, AnkeTraut @.***> wrote:

I tested the MPA with the the demo .fasta and the .mgf files according to the publiation of Schiebenhöfer et al. 2020 ... but I receive the following error message:

Severe Error Message: java.lang.NullPointerException Level: SEVERE Stack Trace: null de.mpa.db.mysql.accessor.ProjectTableAccessor.findAllProjects(ProjectTableAccessor.java:395) de.mpa.db.mysql.ProjectManager.getProjects(ProjectManager.java:429) de.mpa.client.ui.projectpanel.ProjectPanel.refreshProjectTable(ProjectPanel.java:815) de.mpa.client.ui.projectpanel.ProjectPanel.(ProjectPanel.java:150) de.mpa.client.ui.ClientFrame.initComponents(ClientFrame.java:293) de.mpa.client.ui.ClientFrame.(ClientFrame.java:178) de.mpa.client.ui.ClientFrame.getInstance(ClientFrame.java:138) de.mpa.client.ui.ClientFrame.restart(ClientFrame.java:146) de.mpa.client.ui.inputpanel.SettingsPanel$BatchProcessWorker.doInBackground(SettingsPanel.java:506) javax.swing.SwingWorker$1.call(Unknown Source) java.util.concurrent.FutureTask.run(Unknown Source) javax.swing.SwingWorker.run(Unknown Source) java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) java.lang.Thread.run(Unknown Source)

I activated the MPA MySQL Service manually and restarted the computer but the program still fails...

What can I do?

All the best, Anke

— You are receiving this because you are subscribed to this thread. Reply to this email directly, [ https://github.com/compomics/meta-proteome-analyzer/issues/36 | view it on GitHub ] , or [ https://github.com/notifications/unsubscribe-auth/ADLZCYRIVGH2MP5CTFY5KADTWVAZRANCNFSM5AACBBMQ | unsubscribe ] .

Dear Robert,

thank you very much. I would like to discuss my issues with you. When do you have free time space in your schedule?

All the best, Anke

Dr. Anke Trautwein-Schult University of Greifswald Center for Functional Genomics of Microbes Institute for Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str. 8 17489 Greifswald phone: +49 3834 420 5922 fax: +49 3834 420 5909

Am Donnerstag, den 15-07-2021 um 11:53 schrieb RobertHeyer:

Dear Anke,

if I like we can help you with your issues? Therefore, I would propose to zoom or to skype?

regards

Robert

----- On Jul 8, 2021, at 8:30 AM, AnkeTraut @.***> wrote:

I tested the MPA with the the demo .fasta and the .mgf files according to the publiation of Schiebenhöfer et al. 2020 ... but I receive the following error message:

Severe Error Message: java.lang.NullPointerException Level: SEVERE Stack Trace: null

de.mpa.db.mysql.accessor.ProjectTableAccessor.findAllProjects(ProjectTableAccessor.java:395) de.mpa.db.mysql.ProjectManager.getProjects(ProjectManager.java:429)

de.mpa.client.ui.projectpanel.ProjectPanel.refreshProjectTable(ProjectPanel.java:815) de.mpa.client.ui.projectpanel.ProjectPanel.(ProjectPanel.java:150) de.mpa.client.ui.ClientFrame.initComponents(ClientFrame.java:293) de.mpa.client.ui.ClientFrame.(ClientFrame.java:178) de.mpa.client.ui.ClientFrame.getInstance(ClientFrame.java:138) de.mpa.client.ui.ClientFrame.restart(ClientFrame.java:146)

de.mpa.client.ui.inputpanel.SettingsPanel$BatchProcessWorker.doInBackground(SettingsPanel.java:506) javax.swing.SwingWorker$1.call(Unknown Source) java.util.concurrent.FutureTask.run(Unknown Source) javax.swing.SwingWorker.run(Unknown Source) java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) java.lang.Thread.run(Unknown Source)

I activated the MPA MySQL Service manually and restarted the computer but the program still fails...

What can I do?

All the best, Anke

— You are receiving this because you are subscribed to this thread. Reply to this email directly, [ https://github.com/compomics/meta-proteome-analyzer/issues/36 | view it on GitHub ] , or [

https://github.com/notifications/unsubscribe-auth/ADLZCYRIVGH2MP5CTFY5KADTWVAZRANCNFSM5AACBBMQ | unsubscribe ] .

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub [1], or unsubscribe [2].

Links:

[1] https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-880560130 [2] https://github.com/notifications/unsubscribe-auth/ANJU32PVCP5LYE4JM2SIEJTTX2V2TANCNFSM5AACBBMQ

Hallo Anke,

wir wäre es mit Mittwoch um 8.00?

Robert

----- On Aug 4, 2021, at 9:00 AM, AnkeTraut @.***> wrote:

Dear Robert,

thank you very much. I would like to discuss my issues with you. When do you have free time space in your schedule?

All the best, Anke

Dr. Anke Trautwein-Schult University of Greifswald Center for Functional Genomics of Microbes Institute for Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str. 8 17489 Greifswald phone: +49 3834 420 5922 fax: +49 3834 420 5909

Am Donnerstag, den 15-07-2021 um 11:53 schrieb RobertHeyer:

Dear Anke,

if I like we can help you with your issues? Therefore, I would propose to zoom or to skype?

regards

Robert

----- On Jul 8, 2021, at 8:30 AM, AnkeTraut @.***> wrote:

I tested the MPA with the the demo .fasta and the .mgf files according to the publiation of Schiebenhöfer et al. 2020 ... but I receive the following error message:

Severe Error Message: java.lang.NullPointerException Level: SEVERE Stack Trace: null

de.mpa.db.mysql.accessor.ProjectTableAccessor.findAllProjects(ProjectTableAccessor.java:395)

de.mpa.db.mysql.ProjectManager.getProjects(ProjectManager.java:429)

de.mpa.client.ui.projectpanel.ProjectPanel.refreshProjectTable(ProjectPanel.java:815)

de.mpa.client.ui.projectpanel.ProjectPanel.(ProjectPanel.java:150) de.mpa.client.ui.ClientFrame.initComponents(ClientFrame.java:293) de.mpa.client.ui.ClientFrame.(ClientFrame.java:178) de.mpa.client.ui.ClientFrame.getInstance(ClientFrame.java:138) de.mpa.client.ui.ClientFrame.restart(ClientFrame.java:146)

de.mpa.client.ui.inputpanel.SettingsPanel$BatchProcessWorker.doInBackground(SettingsPanel.java:506)

javax.swing.SwingWorker$1.call(Unknown Source) java.util.concurrent.FutureTask.run(Unknown Source) javax.swing.SwingWorker.run(Unknown Source) java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) java.lang.Thread.run(Unknown Source)

I activated the MPA MySQL Service manually and restarted the computer but the program still fails...

What can I do?

All the best, Anke

— You are receiving this because you are subscribed to this thread. Reply to this email directly, [ https://github.com/compomics/meta-proteome-analyzer/issues/36 | view it on GitHub ] , or [

https://github.com/notifications/unsubscribe-auth/ADLZCYRIVGH2MP5CTFY5KADTWVAZRANCNFSM5AACBBMQ

| unsubscribe ] .

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub [1], or unsubscribe [2].

Links:

[1] https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-880560130 [2] https://github.com/notifications/unsubscribe-auth/ANJU32PVCP5LYE4JM2SIEJTTX2V2TANCNFSM5AACBBMQ

— You are receiving this because you commented. Reply to this email directly, [ https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-892415547 | view it on GitHub ] , or [ https://github.com/notifications/unsubscribe-auth/ADLZCYX7HQ6E2XABYUPC7PDT3DQPTANCNFSM5AACBBMQ | unsubscribe ] . Triage notifications on the go with GitHub Mobile for [ https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 | iOS ] or [ https://play.google.com/store/apps/details?id=com.github.android&utm_campaign=notification-email | Android ] .

Hallo Robert,

sehr gerne, das passt in meinen Plan.

LG Anke

Am Montag, den 09-08-2021 um 10:42 schrieb RobertHeyer:

Hallo Anke,

wir wäre es mit Mittwoch um 8.00?

Robert

----- On Aug 4, 2021, at 9:00 AM, AnkeTraut @.***> wrote:

Dear Robert,

thank you very much. I would like to discuss my issues with you. When do you have free time space in your schedule?

All the best, Anke

Dr. Anke Trautwein-Schult University of Greifswald Center for Functional Genomics of Microbes Institute for Microbiology Department of Microbial Proteomics Felix-Hausdorff-Str. 8 17489 Greifswald phone: +49 3834 420 5922 fax: +49 3834 420 5909

Am Donnerstag, den 15-07-2021 um 11:53 schrieb RobertHeyer:

Dear Anke,

if I like we can help you with your issues? Therefore, I would propose to zoom or to skype?

regards

Robert

----- On Jul 8, 2021, at 8:30 AM, AnkeTraut @.***> wrote:

I tested the MPA with the the demo .fasta and the .mgf files according to the publiation of Schiebenhöfer et al. 2020 ... but I receive the following error message:

Severe Error Message: java.lang.NullPointerException Level: SEVERE Stack Trace: null

de.mpa.db.mysql.accessor.ProjectTableAccessor.findAllProjects(ProjectTableAccessor.java:395)

de.mpa.db.mysql.ProjectManager.getProjects(ProjectManager.java:429)

de.mpa.client.ui.projectpanel.ProjectPanel.refreshProjectTable(ProjectPanel.java:815)

de.mpa.client.ui.projectpanel.ProjectPanel.(ProjectPanel.java:150) de.mpa.client.ui.ClientFrame.initComponents(ClientFrame.java:293) de.mpa.client.ui.ClientFrame.(ClientFrame.java:178) de.mpa.client.ui.ClientFrame.getInstance(ClientFrame.java:138) de.mpa.client.ui.ClientFrame.restart(ClientFrame.java:146)

de.mpa.client.ui.inputpanel.SettingsPanel$BatchProcessWorker.doInBackground(SettingsPanel.java:506)

javax.swing.SwingWorker$1.call(Unknown Source) java.util.concurrent.FutureTask.run(Unknown Source) javax.swing.SwingWorker.run(Unknown Source) java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source) java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source) java.lang.Thread.run(Unknown Source)

I activated the MPA MySQL Service manually and restarted the computer but the program still fails...

What can I do?

All the best, Anke

— You are receiving this because you are subscribed to this thread. Reply to this email directly, [ https://github.com/compomics/meta-proteome-analyzer/issues/36 | view it on GitHub ] , or [

https://github.com/notifications/unsubscribe-auth/ADLZCYRIVGH2MP5CTFY5KADTWVAZRANCNFSM5AACBBMQ

| unsubscribe ] .

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub [1], or unsubscribe [2].

Links:

[1]

https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-880560130 [2]

https://github.com/notifications/unsubscribe-auth/ANJU32PVCP5LYE4JM2SIEJTTX2V2TANCNFSM5AACBBMQ

— You are receiving this because you commented. Reply to this email directly, [

https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-892415547 | view it on GitHub ] , or [

https://github.com/notifications/unsubscribe-auth/ADLZCYX7HQ6E2XABYUPC7PDT3DQPTANCNFSM5AACBBMQ | unsubscribe ] . Triage notifications on the go with GitHub Mobile for [

https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 | iOS ] or [

https://play.google.com/store/apps/details?id=com.github.android&utm_campaign=notification-email | Android ] .

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub [1], or unsubscribe [2]. Triage notifications on the go with GitHub Mobile for iOS [3] or Android [4].

Links:

[1] https://github.com/compomics/meta-proteome-analyzer/issues/36#issuecomment-895049319 [2] https://github.com/notifications/unsubscribe-auth/ANJU32KR2YB676HI3U2RBTTT36IGLANCNFSM5AACBBMQ [3] https://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 [4] https://play.google.com/store/apps/details?id=com.github.android&utm_campaign=notification-email

compomics / meta-proteome-analyzer