predicted library for DIA-NN (question)

compomics / ms2pip

MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.

https://ms2pip.readthedocs.io

Apache License 2.0

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predicted library for DIA-NN (question) #222

Open Li5459000 opened 3 months ago

Li5459000 commented 3 months ago

Hi Ralf,

I'm currently using MS2PIP to predict a spectral library for DIA-NN analysis. I obtained a '.msp' file and loaded it into the 'spectral library' of the DIA-NN GUI. But DIA-NN does not support this file type.

I'm sorry, I've just started working in the field of proteomics.

Best Regards, Li

RalfG commented 2 weeks ago

Hi Li,

Apologies for the delayed response. Do you still have the error that DIA-NN produced when importing the MSP library? We have tested MSP files specifically for DIA-NN, but perhaps something changed since our previous test.

Thanks! Ralf