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compomics / ms2rescore

Modular and user-friendly platform for AI-assisted rescoring of peptide identifications
https://ms2rescore.readthedocs.io
Apache License 2.0
39 stars 14 forks source link

[Bug] Use Percolator protein-decoy-pattern to generate pin files if provided by user #26

Closed tivdnbos closed 3 years ago

tivdnbos commented 3 years ago

For Tandem pipeline, "REVERSED" is used as default while "decoy_" is specified by user.

RalfG commented 3 years ago

id_decoy_pattern is already an option. Does it work for your usecase? https://github.com/compomics/ms2rescore/blob/master/configuration.md#properties

tivdnbos commented 3 years ago

Yep, that works!