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compomics / ms2rescore

Modular and user-friendly platform for AI-assisted rescoring of peptide identifications
https://ms2rescore.readthedocs.io
Apache License 2.0
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N-terminal modifications should be added according old version of MS2PIP #3

Closed tivdnbos closed 5 years ago

tivdnbos commented 5 years ago

Hi,

Instead of adding a N-terminal modification for ms2pip in rescore.py like this: nterm=Acetylation,42.010565,opt it should be added in rescore.py like this (according to an older version of MS2PIP): ptm=Acetylation,42.010565,opt,N-term

anasilviacs commented 5 years ago

the latest version of MS2PIP is now used, and the modifications are generated based on the config file instead of hard-coded