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compomics / peptide-shaker

Interpretation of proteomics identification results
http://compomics.github.io/projects/peptide-shaker.html
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custom export #435

Closed hale94 closed 3 years ago

hale94 commented 3 years ago

when I try to create a custom export protocol on v 2.0.7 I get the following error message and the protocol is not saved

An error occurred: C:\Users\John\peptideshaker\exportFactory.cus (Access is denied) If the problem persists please contact the developers.

Any help would be appreciated.

hbarsnes commented 3 years ago

You need to have write access to the C:\Users\John\peptideshaker folder. If this is not the case, and it cannot be changed, you can change the temp folders via the PeptideShaker Welcome dialog > Settings & Help > Settings > Resource Settings.

hale94 commented 3 years ago

I have write privileges to that folder. The new version (2.0.8) does not save custom exports either.

From: Harald Barsnes notifications@github.com Sent: Monday, December 21, 2020 1:29 PM To: compomics/peptide-shaker peptide-shaker@noreply.github.com Cc: hale94 thehales94@gmail.com; Author author@noreply.github.com Subject: Re: [compomics/peptide-shaker] custom export (#435)

You need to have write access to the C:\Users\John\peptideshaker folder. If this is not the case, and it cannot be changed, you can change the temp folders via the PeptideShaker Welcome dialog > Settings & Help > Settings > Resource Settings.

— You are receiving this because you authored the thread. Reply to this email directly, https://github.com/compomics/peptide-shaker/issues/435#issuecomment-749204803 view it on GitHub, or https://github.com/notifications/unsubscribe-auth/AEMPM7N3WUGRV7JVGLYOPNLSV64YNANCNFSM4VERLGSA unsubscribe.

hbarsnes commented 3 years ago

I have write privileges to that folder. The new version (2.0.8) does not save custom exports either.

Creating custom exports work fine on my side. Could it be that you have more than one PeptideShaker instance running at the same time?

And did you try redirecting the export folder just to see if that made a difference?

hbarsnes commented 3 years ago

We just released PeptideShaker v2.0.15 that restores the saving of the custom exports. I hope you were also able to solve the access denied issue? If not, please let us know and we'll open the issue.