Open jcanderan opened 3 months ago
Thanks for sharing the test data. I can confirm that the error is reproduced on my end. I will look into it after the summer holidays and see if I can come up with a fix.
I've finally released a new version of PeptideShaker with a quick fix that supports slightly larger databases. You should now be able to load your data. However, the issue may reappear if using even larger databases. Hence, a proper fix ought to be implemented at some point. I will therefore keep the issue open as a reminder.
Hello,
I posted about this issue in the #438 but wasn't able to duplicate it reliably. I've encountered it again and have been able to duplicate it consistently on different machines (even with re-running SearchGUI) with the same file.
edit: noticed I also had it opened as #485 but it was only temporarily resolved and has returned
Typically it goes away after re-trying a number of times but not this time.
(same error as below on a linux machine with 64 GB and Java 19)
I put the searchgui_out.zip here
Thanks!
Error from PeptideShaker side:
Contents of the log file: