codecov-commenter
commented
2 years ago Codecov Report
Base: 38.80% // Head: 37.98% // Decreases project coverage by -0.81% :warning:
Coverage data is based on head (
b097812) compared to base (0efe226). Patch coverage: 37.62% of modified lines in pull request are covered.
Additional details and impacted files
```diff @@ Coverage Diff @@ ## main #19 +/- ## ========================================== - Coverage 38.80% 37.98% -0.82% ========================================== Files 18 18 Lines 1353 1390 +37 ========================================== + Hits 525 528 +3 - Misses 828 862 +34 ``` | [Impacted Files](https://codecov.io/gh/compomics/psm_utils/pull/19?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | Coverage Δ | | |---|---|---| | [psm\_utils/peptidoform.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL3BlcHRpZG9mb3JtLnB5) | `25.56% <10.00%> (-2.00%)` | :arrow_down: | | [psm\_utils/io/\_\_init\_\_.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL19faW5pdF9fLnB5) | `36.36% <18.75%> (-3.64%)` | :arrow_down: | | [psm\_utils/io/mzid.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL216aWQucHk=) | `30.62% <33.33%> (-0.15%)` | :arrow_down: | | [psm\_utils/psm.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL3BzbS5weQ==) | `70.73% <37.50%> (ø)` | | | [psm\_utils/io/tsv.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL3Rzdi5weQ==) | `39.32% <40.00%> (ø)` | | | [psm\_utils/io/maxquant.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL21heHF1YW50LnB5) | `84.90% <50.00%> (ø)` | | | [psm\_utils/io/msamanda.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL21zYW1hbmRhLnB5) | `70.90% <50.00%> (ø)` | | | [psm\_utils/psm\_list.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL3BzbV9saXN0LnB5) | `25.00% <50.00%> (-1.17%)` | :arrow_down: | | [psm\_utils/io/percolator.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL3BlcmNvbGF0b3IucHk=) | `29.16% <57.14%> (ø)` | | | [psm\_utils/io/idxml.py](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#diff-cHNtX3V0aWxzL2lvL2lkeG1sLnB5) | `63.88% <66.66%> (-0.98%)` | :arrow_down: | | ... and [4 more](https://codecov.io/gh/compomics/psm_utils/pull/19/diff?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics):umbrella: View full report at Codecov.
:loudspeaker: Do you have feedback about the report comment? Let us know in this issue.
PeptideSpectrumMatch.peptidetoPeptideSpectrumMatch.peptidoform(BREAKING CHANGE)PeptideSpectrumMatchtoPSM(BREAKING CHANGE)psm_utils.io.write_file()functionPeptidoform