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compomics / psm_utils

Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
https://psm-utils.readthedocs.io
Apache License 2.0
24 stars 6 forks source link

Improve TSV reading error handling #88

Closed RalfG closed 4 weeks ago

RalfG commented 4 weeks ago

Fixed

codecov[bot] commented 4 weeks ago

Codecov Report

Attention: Patch coverage is 85.71429% with 1 line in your changes missing coverage. Please review.

Project coverage is 65.06%. Comparing base (8438dbc) to head (dd9aac0).

Files Patch % Lines
psm_utils/io/tsv.py 85.71% 1 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #88 +/- ## ========================================== + Coverage 64.73% 65.06% +0.33% ========================================== Files 26 26 Lines 2501 2505 +4 ========================================== + Hits 1619 1630 +11 + Misses 882 875 -7 ``` | [Flag](https://app.codecov.io/gh/compomics/psm_utils/pull/88/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/compomics/psm_utils/pull/88/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | `65.06% <85.71%> (+0.33%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#carryforward-flags-in-the-pull-request-comment) to find out more.

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