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compomics / psm_utils

Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python
https://psm-utils.readthedocs.io
Apache License 2.0
25 stars 7 forks source link

Add reader and writer for FlashLFQ #96

Closed RalfG closed 2 months ago

RalfG commented 2 months ago

Added

codecov[bot] commented 2 months ago

Codecov Report

Attention: Patch coverage is 87.77778% with 11 lines in your changes missing coverage. Please review.

Project coverage is 67.68%. Comparing base (83dff49) to head (12b1540). Report is 6 commits behind head on main.

Files with missing lines Patch % Lines
psm_utils/io/flashlfq.py 87.50% 11 Missing :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #96 +/- ## ========================================== + Coverage 66.11% 67.68% +1.56% ========================================== Files 26 27 +1 Lines 2538 2627 +89 ========================================== + Hits 1678 1778 +100 + Misses 860 849 -11 ``` | [Flag](https://app.codecov.io/gh/compomics/psm_utils/pull/96/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | Coverage Δ | | |---|---|---| | [unittests](https://app.codecov.io/gh/compomics/psm_utils/pull/96/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics) | `67.68% <87.77%> (+1.56%)` | :arrow_up: | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=compomics#carryforward-flags-in-the-pull-request-comment) to find out more.

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