computational-cell-analytics / vimunet-benchmarking

Benchmarking nnU-Netv2 and U-Mamba for Biomedical Segmentation
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UMamba in encoder #1

Open anwai98 opened 8 months ago

anwai98 commented 8 months ago

UMambaEnc is a little weird. The training didn't work at all for 3/5 folds.

Suspicions:

PS: UMambaEnc - mamba implementation in the entire encoder; UMambaBot - mamba bottleneck layer b/w encoder and decoder

anwai98 commented 6 months ago

Other users have faced the issue as well:

  1. Ref: UMamba - https://github.com/bowang-lab/U-Mamba/issues/8
  2. Ref: Vim - https://github.com/hustvl/Vim/issues/30

Mention: I have faced Point 1 extensively, and Point 2 in ViMUNet for the largest vim model (vim_b)

Edit: Both the issues are taken care of now (in U-Mamba and ViM-UNet)

anwai98 commented 6 months ago

Also, a nice spot to track Vision Mamba-related work: https://github.com/VisionMamba