MIRACLE iEMSs Prototype TODOs

[warmdev]

====== UI ENHANCEMENT ======

• [x] Refresh app after data archive upload, and redirect user to a result page that shows the number of data groups and script identified, with links to analysis and data groups tabs https://github.com/comses/miracle/issues/56
• [x] Make project context menu horizontal, and Data Explorer iFrame full width https://github.com/comses/miracle/issues/55
• [ ] Enhance UI to display project activity (running analysis, sharing and commenting)
• [ ] Gallery for script output image
• [ ] Project menu reorganization: Overview, Data Explorer, View/Edit Metadata (which can contain two tabs: Dataset - general description, and Data Groups - column-level metadata), Analysis scripts (which can contain Run analysis and Dependencies), Apps (which can contain Shiny Apps and RMarkdown), Activities, Upload archive
• [x] After user creates a new project and before archive is uploaded, hide or grey out tabs other than overview and upload archive. After archive is uploaded, hide or grey out upload archive

===== BUGS =====

• [x] Bugfix: When clicking tabs that are longer than screen size (for example dependencies and analysis tabs), the page automatically scroll down a few lines and you cannot see the page title unless manually scroll back
• [x] The short-name bug https://github.com/comses/miracle/issues/41

====== DATA ======

• [ ] Enhance the UI for metadata editing (something like handsontable)
• [ ] A page with description for dataset, comment on dataset
• [ ] Integrate with external data repository such as Dataverse

====== SCRIPTS AND ANALYSES ======

• [ ] UI for Shiny apps and RMarkdown documents https://github.com/comses/miracle/issues/67
• [ ] Comment on scripts and analyses
• [ ] Make scripts metadata (description and authors) editable
• [ ] Scope for sharing (within project, within MIRACLE, external - email)
• [ ] Make scripts available by default to facilitate testing
• [ ] Customized run parameter interface based on input pattern (for example, dropdown menu for valueList, checkboxes for valueSet)
• [ ] Interface for workflows if an analysis contain a chain of multiple scripts
• [ ] Organize previous run results as a table (name, parameters, outputfiles, time, user, etc.)

====== USER ======

• [ ] Expose user registration UI
• [ ] Allow user to Join a project (currently admin can add users)

====== ADMIN ======

• [ ] Project admin can delete project https://github.com/comses/miracle/issues/53
• [ ] Project admin UI

===== INFRASTRUCTURE =====

• [ ] Per-project and per-user containers with Docker Swarm or docker-py