Closed yarikoptic closed 4 years ago
actually now I did get ID (btw ORCID_ID
better be something different since first I assumed that it is my orcid id, e.g. ORCID_CLIENT_ID
), exported both ID and SECRET but getting the same....
AH - that is because I decided to start anew so removed .tributors
altogether. Why not to stop demanding init
and just initiate it empty? if empty -- it would get slowly populated (in its "cache" functionality ;))
I think it would be better if just generated empty than leave me stranded or direct to RTFM:
(git-annex)lena:~/proj/open-brain-consent[master]git
$> tributors init
INFO:github:Please specify one or more parsers, one of zenodo, codemeta
$> tributors init zenodo
Please provide the zenodo doi with --doi
# we do not have zenodo yet
$> tributors init codemeta
Codemeta provides several tools to generate this for you: https://codemeta.github.io/tools/
# sorry -- don't want to go somewhere to just start going
I think smth like that worked in the past but no longer
$> echo '{}' > .zenodo.json
$> tributors init
INFO:github:Please specify one or more parsers, one of zenodo, codemeta
$> tributors init zenodo
Please provide the zenodo doi with --doi
Please make it tolerate a silly yarik who just wants to talk to orcid and get his .all-contributorsrc used to populate .zenodo.json in OBC
NB will be offline for a bit -- family drags me away
BTW it said that it wrong my secret but they seems to be not there:
(git-annex)lena:~/proj/open-brain-consent[master]git
$> python -m pdb `which tributors` update
> /home/yoh/proj/tributors/venvs/dev3/bin/tributors(3)<module>()
-> __requires__ = 'tributors'
(Pdb) c
DEBUG:urllib3.connectionpool:Starting new HTTPS connection (1): orcid.org:443
DEBUG:urllib3.connectionpool:https://orcid.org:443 "POST /oauth/token HTTP/1.1" 200 None
Orcid token exports written to /home/yoh/.tmp/tributors-kc6pctlp. In the future export these variables for headless usage.
INFO:allcontrib:Updating .all-contributorsrc
Traceback (most recent call last):
File "/usr/lib/python3.8/pdb.py", line 1703, in main
pdb._runscript(mainpyfile)
File "/usr/lib/python3.8/pdb.py", line 1572, in _runscript
self.run(statement)
File "/usr/lib/python3.8/bdb.py", line 580, in run
exec(cmd, globals, locals)
File "<string>", line 1, in <module>
File "/home/yoh/proj/tributors/venvs/dev3/bin/tributors", line 3, in <module>
__requires__ = 'tributors'
File "/home/yoh/proj/tributors/tributors/client/__init__.py", line 145, in main
main(args, extra)
File "/home/yoh/proj/tributors/tributors/client/update.py", line 53, in main
client.update(parsers=parsers, repo=args.repo, params=extra, thresh=args.thresh)
File "/home/yoh/proj/tributors/tributors/main/__init__.py", line 107, in update
client.update(thresh=thresh)
File "/home/yoh/proj/tributors/tributors/main/parsers/allcontrib.py", line 120, in update
self.lookup = {x["login"]: x for x in self.data.get("contributors", [])}
File "/home/yoh/proj/tributors/tributors/main/parsers/allcontrib.py", line 120, in <dictcomp>
self.lookup = {x["login"]: x for x in self.data.get("contributors", [])}
KeyError: 'login'
Uncaught exception. Entering post mortem debugging
Running 'cont' or 'step' will restart the program
> /home/yoh/proj/tributors/tributors/main/parsers/allcontrib.py(120)<dictcomp>()
-> self.lookup = {x["login"]: x for x in self.data.get("contributors", [])}
(Pdb)
Post mortem debugger finished. The /home/yoh/proj/tributors/venvs/dev3/bin/tributors will be restarted
> /home/yoh/proj/tributors/venvs/dev3/bin/tributors(3)<module>()
-> __requires__ = 'tributors'
(Pdb)
$> cat /home/yoh/.tmp/tributors-kc6pctlp
$>
Ah I didn't know that wasn't required, we'll need to fix that.
You are saying this file does not exist?
Orcid token exports written to /home/yoh/.tmp/tributors-kc6pctlp. In the future export these variables for headless usage.
Seems to exist but empty
okay so I'm removing the GitHub parsing of metadata to update tributors away from happening by default. It will still iterate through the repo contributors from the GitHub api, but the metadata won't be updated unless you ask for it. I've also removed the requirement of a doi, so for your use case you would probably want to do:
tributors init zenodo
tributors update-lookup github
tributors update zenodo
This issue is not clear, so what needs to be addressed specifically is:
Also @yarikoptic an Orcid Client ID doesn't refer to an orcid id, it refers to the client that you register as a developer app. It also has a secret.
I got that, and suggested in https://github.com/con/tributors/issues/37#issuecomment-653679768 to rename variable to make it clear
Oh I fixed the bug for 3! Sorry to clarify, there was a bug and I found it and fixed it (hopefully!)
why just not to assume the same whenever there is no ORCID_TOKEN? or that is not the reason for