Missing file libstdc++.so.6.0.24 AND running feelnc program.

[rgg2]

Comment:

I am using conda 4.12.0 This is on an HPC system loaded as a module Anaconda3

The link in the library is missing file libstdc++.so.6.0.24. "libstdc++.so.6.0.21 -> libstdc++.so.6.0.24" is broken from bioperl install I am running the following command to install bioperl to run with feelnc. Am I missing an install?

conda install -c conda-forge -c bioconda/label/cf201901 snippy perl-bioperl-core perl-bioperl perl-bioperl-run perl-xml-simple

But when I run a perl script I get the following error.

Can't locate Bio/DB/Fasta.pm in @INC (you may need to install the Bio::DB::Fasta module) (@INC contains: /cm/shared/apps/feelnc/0.2/lib /cm/shared/apps/bioperl/1.7.8/lib/perl5 /cm/shared/apps/feelnc/.0.2/lib /cm/shared/apps/bioperl/1.7.8/lib/t_coffee-11.0.8/perl/lib/perl5/x86_64-linux-thread-multi/HTML /cm/shared/apps/Perl/5.32.1-GCCcore-10.3.0/lib/perl5/site_perl/5.32.1/x86_64-linux-thread-multi /cm/shared/apps/Perl/5.32.1-GCCcore-10.3.0/lib/perl5/site_perl/5.32.1 /cm/shared/apps/Perl/5.32.1-GCCcore-10.3.0/lib/perl5/5.32.1/x86_64-linux-thread-multi /cm/shared/apps/Perl/5.32.1-GCCcore-10.3.0/lib/perl5/5.32.1) at /cm/shared/apps/feelnc/0.2/lib/StringUtils.pm line 7. BEGIN failed--compilation aborted at /cm/shared/apps/feelnc/0.2/lib/StringUtils.pm line 7. Compilation failed in require at /cm/shared/apps/feelnc/0.2/lib/ExtractFromHash.pm line 9. BEGIN failed--compilation aborted at /cm/shared/apps/feelnc/0.2/lib/ExtractFromHash.pm line 9. Compilation failed in require at /cm/shared/apps/feelnc/0.2/lib/Parser.pm line 10. BEGIN failed--compilation aborted at /cm/shared/apps/feelnc/0.2/lib/Parser.pm line 10. Compilation failed in require at /cm/shared/apps/feelnc/0.2/lib/FEELnc_filter.pl line 13. BEGIN failed--compilation aborted at /cm/shared/apps/feelnc/0.2/lib/FEELnc_filter.pl line 13.

[isuruf]

This is not the anaconda issue tracker. This issue tracker is only for conda-forge