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conda-forge / geopandas-feedstock

A conda-smithy repository for geopandas.
BSD 3-Clause "New" or "Revised" License
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Jupyter Notebook import geopandas failure #51

Closed gigglypear closed 5 years ago

gigglypear commented 5 years ago

Issue:

Hi I installed GeoPandas but cannot import to Jupyter Notebook. I tried to read the past issues and tried different things but still did not work. Does anyone know how to fix this issue? All helps are appreciated!

Error Message:

---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
<ipython-input-12-f8b81fe8ca07> in <module>()
----> 1 import geopandas as gpd

~/anaconda3/lib/python3.6/site-packages/geopandas/__init__.py in <module>()
      2 from geopandas.geodataframe import GeoDataFrame
      3 
----> 4 from geopandas.io.file import read_file
      5 from geopandas.io.sql import read_postgis
      6 from geopandas.tools import sjoin

~/anaconda3/lib/python3.6/site-packages/geopandas/io/file.py in <module>()
      1 import os
      2 
----> 3 import fiona
      4 import numpy as np
      5 import six

~/anaconda3/lib/python3.6/site-packages/fiona/__init__.py in <module>()
     81     os.environ["PATH"] = os.environ["PATH"] + ";" + libdir
     82 
---> 83 from fiona.collection import BytesCollection, Collection
     84 from fiona.drvsupport import supported_drivers
     85 from fiona.env import ensure_env_with_credentials, Env

~/anaconda3/lib/python3.6/site-packages/fiona/collection.py in <module>()
      7 
      8 from fiona import compat, vfs
----> 9 from fiona.ogrext import Iterator, ItemsIterator, KeysIterator
     10 from fiona.ogrext import Session, WritingSession
     11 from fiona.ogrext import buffer_to_virtual_file, remove_virtual_file, GEOMETRY_TYPES

ImportError: dlopen(/Users/s.n.zhou/anaconda3/lib/python3.6/site-packages/fiona/ogrext.cpython-36m-darwin.so, 2): Library not loaded: @rpath/libjpeg.9.dylib
  Referenced from: /Users/s.n.zhou/anaconda3/lib/libgdal.20.dylib
  Reason: Incompatible library version: libgdal.20.dylib requires version 13.0.0 or later, but libjpeg.9.dylib provides version 12.0.0

I tried the following: 

conda install -c conda-forge fiona shapely pyproj rtree

And got the following message 

Collecting package metadata: done
Solving environment: done

 Package Plan 

  environment location: /Users/s.n.zhou/anaconda3

  added / updated specs:
    - fiona
    - pyproj
    - rtree
    - shapely

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    fiona-1.8.5                |   py36h7eb7563_0         982 KB  conda-forge
    gdal-2.4.0                 |py36h7eb7563_1005         1.3 MB  conda-forge
    pip-19.0.3                 |           py36_0         1.8 MB  conda-forge
    poppler-0.67.0             |    hf4bf5f7_1002         1.6 MB  conda-forge
    pyproj-1.9.6               |py36h9c430a6_1000          64 KB  conda-forge
    setuptools-40.8.0          |           py36_0         628 KB  conda-forge
    shapely-1.6.4              |py36h2bcc7ef_1002         300 KB  conda-forge
    six-1.12.0                 |        py36_1000          22 KB  conda-forge
    wheel-0.33.1               |           py36_0          34 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         6.8 MB

The following NEW packages will be INSTALLED:

  geotiff            conda-forge/osx-64::geotiff-1.4.3-hce09ea4_1000
  pip                conda-forge/osx-64::pip-19.0.3-py36_0
  postgresql         conda-forge/osx-64::postgresql-11.2-h16efa30_0
  tzcode             conda-forge/osx-64::tzcode-2018g-h1de35cc_1001

The following packages will be UPDATED:

  click              pkgs/main/osx-64::click-6.7-py36hec95~ --> conda-forge/noarch::click-7.0-py_0
  fiona               pkgs/main::fiona-1.8.4-py36h9a122fd_0 --> conda-forge::fiona-1.8.5-py36h7eb7563_0
  gdal                 pkgs/main::gdal-2.3.3-py36hbe65578_0 --> conda-forge::gdal-2.4.0-py36h7eb7563_1005
  giflib                                5.1.4-h1de35cc_1001 --> 5.1.7-h01d97ff_1
  jpeg                        pkgs/main::jpeg-9b-haccd157_1 --> conda-forge::jpeg-9c-h1de35cc_1001
  kealib                 pkgs/main::kealib-1.4.7-hf5ed860_6 --> conda-forge::kealib-1.4.10-hf5ed860_1002
  libgdal               pkgs/main::libgdal-2.3.3-h0950a36_0 --> conda-forge::libgdal-2.4.0-h16bfee5_1005
  libnetcdf           pkgs/main::libnetcdf-4.6.1-hd5207e6_2 --> conda-forge::libnetcdf-4.6.2-h6b88ef6_1001
  poppler              pkgs/main::poppler-0.65.0-ha097c24_1 --> conda-forge::poppler-0.67.0-hf4bf5f7_1002
  pyproj             pkgs/main::pyproj-1.9.6-py36h9c430a6_0 --> conda-forge::pyproj-1.9.6-py36h9c430a6_1000
  setuptools         pkgs/main::setuptools-36.5.0-py36h213~ --> conda-forge::setuptools-40.8.0-py36_0
  shapely            pkgs/main::shapely-1.6.4-py36he8793f5~ --> conda-forge::shapely-1.6.4-py36h2bcc7ef_1002
  six                  pkgs/main::six-1.11.0-py36h0e22d5e_1 --> conda-forge::six-1.12.0-py36_1000
  wheel              pkgs/main::wheel-0.29.0-py36h3597b6d_1 --> conda-forge::wheel-0.33.1-py36_0

The following packages will be SUPERSEDED by a higher-priority channel:

  attrs                                           pkgs/main --> conda-forge

Proceed ([y]/n)? y

Downloading and Extracting Packages
setuptools-40.8.0    | 628 KB    | ##################################### | 100% 
pip-19.0.3           | 1.8 MB    | ##################################### | 100% 
shapely-1.6.4        | 300 KB    | ##################################### | 100% 
gdal-2.4.0           | 1.3 MB    | ##################################### | 100% 
fiona-1.8.5          | 982 KB    | ##################################### | 100% 
six-1.12.0           | 22 KB     | ##################################### | 100% 
wheel-0.33.1         | 34 KB     | ##################################### | 100% 
pyproj-1.9.6         | 64 KB     | ##################################### | 100% 
poppler-0.67.0       | 1.6 MB    | ##################################### | 100% 
Preparing transaction: done
Verifying transaction: done
Executing transaction: done

Because I have tried to install with pip before, I uninstalled from pip and then re-installed again with conda using conda install -c conda-forge geopandas.

I also tried conda update jpeg but it told me that All requested packages already installed..

Environment (conda list):

``` $ conda list # packages in environment at /Users/s.n.zhou/anaconda3: # # Name Version Build Channel _ipyw_jlab_nb_ext_conf 0.1.0 py36h2fc01ae_0 alabaster 0.7.10 py36h174008c_0 anaconda 5.0.1 py36h6e48e2d_1 anaconda-client 1.7.2 py36_0 anaconda-navigator 1.9.6 py36_0 anaconda-project 0.8.0 py36h99320b2_0 appnope 0.1.0 py36hf537a9a_0 appscript 1.0.1 py36h9e71e49_1 asn1crypto 0.22.0 py36hb705621_1 astroid 1.5.3 py36h1333018_0 astropy 2.0.2 py36hf79c81d_4 attrs 19.1.0 py_0 conda-forge babel 2.5.0 py36h9f161ff_0 backports 1.0 py36ha3c1827_1 backports.shutil_get_terminal_size 1.0.0 py36hd7a2ee4_2 beautifulsoup4 4.6.0 py36h72d3c9f_1 bitarray 0.8.1 py36h20fa61d_0 bkcharts 0.2 py36h073222e_0 blas 1.0 mkl blaze 0.11.3 py36h02e7a37_0 bleach 2.0.0 py36h8fcea71_0 blosc 1.15.0 hd9629dc_0 bokeh 0.12.10 py36hfd5be35_0 boost 1.66.0 py36_1 conda-forge boost-cpp 1.66.0 1 conda-forge boto 2.48.0 py36hdbc59ac_1 bottleneck 1.2.1 py36hbd380ad_0 bzip2 1.0.6 h92991f9_1 ca-certificates 2019.3.9 hecc5488_0 conda-forge cairo 1.14.12 hc4e6be7_4 certifi 2019.3.9 py36_0 conda-forge cffi 1.10.0 py36h880867e_1 chardet 3.0.4 py36h96c241c_1 click 7.0 py_0 conda-forge click-plugins 1.0.4 py_0 conda-forge cligj 0.5.0 py_0 conda-forge cloudpickle 0.4.0 py36h13b7e56_0 clyent 1.2.2 py36hae3ad88_0 colorama 0.3.9 py36hd29a30c_0 conda 4.6.8 py36_0 conda-forge conda-build 3.0.27 py36hb78d8cd_0 conda-env 2.6.0 1 conda-verify 2.0.0 py36he837df3_0 contextlib2 0.5.5 py36hd66e5e7_0 cryptography 2.5 py36hc2b1221_1 conda-forge curl 7.64.0 heae2a1f_2 conda-forge cycler 0.10.0 py36hfc81398_0 cython 0.26.1 py36hd51f8eb_0 cytoolz 0.8.2 py36h290905f_0 dask 0.15.3 py36hc3ad2d6_0 dask-core 0.15.3 py36hc0be6b7_0 datashape 0.5.4 py36hfb22df8_0 dbus 1.13.6 h90a0687_0 decorator 4.1.2 py36h69a1b52_0 descartes 1.1.0 py_2 conda-forge distributed 1.19.1 py36h4ae75d2_0 docutils 0.14 py36hbfde631_0 entrypoints 0.2.3 py36hd81d71f_2 et_xmlfile 1.0.1 py36h1315bdc_0 expat 2.2.6 h0a44026_0 fastcache 1.0.2 py36h8606a76_0 filelock 2.0.12 py36h0d0b4fb_0 fiona 1.8.5 py36h7eb7563_0 conda-forge flask 0.12.2 py36h5658096_0 flask-cors 3.0.3 py36h7387b97_0 fontconfig 2.13.0 h5d5b041_1 freetype 2.9.1 hb4e5f40_0 freexl 1.0.5 h1de35cc_1002 conda-forge gdal 2.4.0 py36h7eb7563_1005 conda-forge geopandas 0.4.1 py_0 conda-forge geos 3.7.1 h0a44026_0 geotiff 1.4.3 hce09ea4_1000 conda-forge get_terminal_size 1.0.0 h7520d66_0 gettext 0.19.8.1 hb0f4f8b_2 gevent 1.2.2 py36ha70b9d6_0 giflib 5.1.7 h01d97ff_1 conda-forge glib 2.56.2 hd9629dc_0 glob2 0.5 py36h12393a9_0 gmp 6.1.2 h4a9834d_0 gmpy2 2.0.8 py36h7ef02cb_1 greenlet 0.4.12 py36hf09ba7b_0 h5py 2.9.0 py36h3134771_0 hdf4 4.2.13 0 conda-forge hdf5 1.10.4 hfa1e0ec_0 heapdict 1.0.0 py36h27a9ac6_0 html5lib 0.999999999 py36h79312fd_0 icu 58.2 hea21ae5_0 idna 2.6 py36h8628d0a_1 imageio 2.2.0 py36h5e01289_0 imagesize 0.7.1 py36h3495948_0 intel-openmp 2018.0.0 h68bdfb3_7 ipykernel 4.6.1 py36h3208c25_0 ipython 6.1.0 py36hf612aae_1 ipython_genutils 0.2.0 py36h241746c_0 ipywidgets 7.0.0 py36h24d3910_0 isort 4.2.15 py36hceb2a01_0 itsdangerous 0.24 py36h49fbb8d_1 jbig 2.1 h4d881f8_0 jdcal 1.3 py36h1986823_0 jedi 0.10.2 py36h6325097_0 jinja2 2.9.6 py36hde4beb4_1 jpeg 9c h1de35cc_1001 conda-forge json-c 0.13.1 h3efe00b_0 jsonschema 2.6.0 py36hb385e00_0 jupyter 1.0.0 py36h598a6cc_0 jupyter_client 5.1.0 py36hf6c435f_0 jupyter_console 5.2.0 py36hccf5b1c_1 jupyter_core 4.3.0 py36h93810fe_0 jupyterlab 0.27.0 py36hd3092eb_2 jupyterlab_launcher 0.4.0 py36h93e02e9_0 kealib 1.4.10 hf5ed860_1002 conda-forge kiwisolver 1.0.1 py36h04f5b5a_1002 conda-forge krb5 1.16.3 hcfa6398_1001 conda-forge lazy-object-proxy 1.3.1 py36h2fbbe47_0 libcurl 7.64.0 he376013_2 conda-forge libcxx 4.0.1 h579ed51_0 libcxxabi 4.0.1 hebd6815_0 libdap4 3.19.1 0 conda-forge libedit 3.1.20170329 hcfe32e1_1001 conda-forge libffi 3.2.1 hd939716_3 libgdal 2.4.0 h16bfee5_1005 conda-forge libgfortran 3.0.1 h93005f0_2 libiconv 1.15 h99df5da_5 libkml 1.3.0 6 conda-forge libnetcdf 4.6.2 h6b88ef6_1001 conda-forge libpng 1.6.36 ha441bb4_0 libpq 11.2 h29c6f28_0 conda-forge libsodium 1.0.13 hba5e272_2 libspatialindex 1.8.5 h0a44026_1003 conda-forge libspatialite 4.3.0a h644ec7d_19 libssh2 1.8.0 h1218725_2 libtiff 4.0.10 hcb84e12_2 libxml2 2.9.9 hab757c2_0 libxslt 1.1.29 h95a2935_5 llvmlite 0.20.0 py36_0 locket 0.2.0 py36hca03003_1 lxml 4.1.0 py36h8179fc0_0 lzo 2.10 hb6b8854_1 mapclassify 2.0.1 py_0 conda-forge markupsafe 1.0 py36h3a1e703_1 matplotlib 3.0.2 py36h54f8f79_0 mccabe 0.6.1 py36hdaeb55d_0 mistune 0.7.4 py36hccd6237_0 mkl 2018.0.0 h5ef208c_6 mkl-service 1.1.2 py36h7ea6df4_4 mpc 1.0.3 hc455b36_4 mpfr 3.1.5 h7fa3772_1 mpmath 0.19 py36h9185fea_2 msgpack-python 0.4.8 py36h46767b2_0 multipledispatch 0.4.9 py36hc5f92b5_0 munch 2.3.2 py_0 conda-forge navigator-updater 0.1.0 py36h7aee5fb_0 nbconvert 5.3.1 py36h810822e_0 nbformat 4.4.0 py36h827af21_0 ncurses 6.1 h0a44026_1002 conda-forge networkx 2.0 py36hefccab9_0 nltk 3.2.4 py36h27d1ea0_0 nose 1.3.7 py36h73fae2b_2 notebook 5.0.0 py36h462289e_2 numba 0.35.0 np113py36_6 numexpr 2.6.2 py36h0f4f1da_1 numpy 1.14.2 py36ha9ae307_0 numpydoc 0.7.0 py36he54d08e_0 odo 0.5.1 py36hc1af34a_0 olefile 0.44 py36ha08bf50_0 openjpeg 2.3.0 hb95cd4c_1 openpyxl 2.4.8 py36he899640_1 openssl 1.1.1b h1de35cc_1 conda-forge packaging 16.8 py36he5e8135_0 pandas 0.24.1 py36h0a44026_0 conda-forge pandoc 1.19.2.1 ha5e8f32_1 pandocfilters 1.4.2 py36h3b0b094_1 partd 0.3.8 py36hf5c4cb8_0 path.py 10.3.1 py36hd33c240_0 pathlib2 2.3.0 py36h877a6d8_0 patsy 0.4.1 py36ha1b3fa5_0 pcre 8.42 h378b8a2_0 pep8 1.7.0 py36hc268eb1_0 pexpect 4.2.1 py36h3eac828_0 pickleshare 0.7.4 py36hf512f8e_0 pillow 5.4.1 py36hb68e598_0 pip 19.0.3 pypi_0 pypi pixman 0.34.0 h1de35cc_1003 conda-forge pkginfo 1.4.1 py36h25bf955_0 ply 3.10 py36h10e714e_0 poppler 0.67.0 hf4bf5f7_1002 conda-forge poppler-data 0.4.9 1 conda-forge postgresql 11.2 h16efa30_0 conda-forge proj4 5.2.0 h0a44026_1 prompt_toolkit 1.0.15 py36haeda067_0 psutil 5.4.0 py36ha052210_0 ptyprocess 0.5.2 py36he6521c3_0 py 1.4.34 py36hecf431b_1 pycodestyle 2.3.1 py36h83e8646_0 pycosat 0.6.3 py36h1de35cc_0 pycparser 2.18 py36h724b2fc_1 pycrypto 2.6.1 py36h72f2894_1 pycurl 7.43.0.2 py36ha12b0ac_0 pyflakes 1.6.0 py36hea45e83_0 pygments 2.2.0 py36h240cd3f_0 pylint 1.7.4 py36hdee9077_0 pyodbc 4.0.17 py36h5478161_0 pyopenssl 17.2.0 py36h5d7bf08_0 pyparsing 2.2.0 py36hb281f35_0 pyproj 1.9.6 py36h9c430a6_1000 conda-forge pyqt 5.6.0 py36he5c6137_6 pysocks 1.6.7 py36hfa33cec_1 pytables 3.4.4 py36h5bccee9_0 pytest 3.2.1 py36h9963153_1 python 3.6.7 h8dc6b48_1004 conda-forge python-dateutil 2.6.1 py36h86d2abb_1 python.app 2 py36h7fe2238_6 pytz 2017.2 py36h2e7dfbc_1 pywavelets 0.5.2 py36h2710a04_0 pyyaml 3.12 py36h2ba1e63_1 pyzmq 16.0.2 py36h087ffad_2 qt 5.6.2 h9975529_14 qtawesome 0.4.4 py36h468c6fb_0 qtconsole 4.3.1 py36hd96c0ff_0 qtpy 1.6.0 py_0 readline 7.0 hcfe32e1_1001 conda-forge requests 2.18.4 py36h4516966_1 rope 0.10.5 py36h5764ad1_0 rtree 0.8.3 py36_1000 conda-forge ruamel_yaml 0.11.14 py36h9d7ade0_2 scikit-image 0.13.0 py36h398857d_1 scikit-learn 0.19.1 py36hffbff8c_0 scipy 1.0.0 py36h1de22e9_0 seaborn 0.8.0 py36h74df97e_0 setuptools 40.8.0 py36_0 conda-forge shapely 1.6.4 py36h2bcc7ef_1002 conda-forge simplegeneric 0.8.1 py36he5b5b09_0 singledispatch 3.4.0.3 py36hf20db9d_0 sip 4.18.1 py36h2824476_2 six 1.12.0 py36_1000 conda-forge snappy 1.1.7 he62c110_3 snowballstemmer 1.2.1 py36h6c7b616_0 sortedcollections 0.5.3 py36he9c3ed6_0 sortedcontainers 1.5.7 py36ha982688_0 sphinx 1.6.3 py36hcd1b3e7_0 sphinxcontrib 1.0 py36h9364dc8_1 sphinxcontrib-websupport 1.0.1 py36h92f4a7a_1 spyder 3.2.4 py36h908396f_0 sqlalchemy 1.1.13 py36h156b851_0 sqlite 3.26.0 h1765d9f_1001 conda-forge statsmodels 0.8.0 py36h9c68fc9_0 sympy 1.1.1 py36h7f3cf04_0 tblib 1.3.2 py36hda67792_0 terminado 0.6 py36h656782e_0 testpath 0.3.1 py36h625a49b_0 tk 8.6.9 ha441bb4_1000 conda-forge toolz 0.8.2 py36h7b95164_0 tornado 4.5.2 py36h468dda9_0 traitlets 4.3.2 py36h65bd3ce_0 typing 3.6.2 py36haa2d9ef_0 tzcode 2018g h1de35cc_1001 conda-forge unicodecsv 0.14.1 py36he531d66_0 unixodbc 2.3.4 h4cb4dde_1 urllib3 1.22 py36h68b9469_0 wcwidth 0.1.7 py36h8c6ec74_0 webencodings 0.5.1 py36h3b9701d_1 werkzeug 0.12.2 py36h168efa1_0 wheel 0.33.1 py36_0 conda-forge widgetsnbextension 3.0.2 py36h91f43ea_1 wrapt 1.10.11 py36hc29e774_0 xerces-c 3.2.2 h44e365a_1001 conda-forge xlrd 1.1.0 py36h336f4a2_1 xlsxwriter 1.0.2 py36h3736301_0 xlwings 0.11.4 py36hc75f156_0 xlwt 1.2.0 py36h5ad1178_0 xz 5.2.4 h1de35cc_1001 conda-forge yaml 0.1.7 hff548bb_1 zeromq 4.2.2 h131e0f7_1 zict 0.1.3 py36h71da714_0 zlib 1.2.11 h60db283_1 zstd 1.3.7 h5bba6e5_0 ```

Details about conda and system ( conda info ):
``` $ conda info active environment : base active env location : /Users/s.n.zhou/anaconda3 shell level : 1 user config file : /Users/s.n.zhou/.condarc populated config files : /Users/s.n.zhou/.condarc conda version : 4.6.8 conda-build version : 3.0.27 python version : 3.6.7.final.0 base environment : /Users/s.n.zhou/anaconda3 (writable) channel URLs : package cache : /Users/s.n.zhou/anaconda3/pkgs /Users/s.n.zhou/.conda/pkgs envs directories : /Users/s.n.zhou/anaconda3/envs /Users/s.n.zhou/.conda/envs platform : osx-64 user-agent : conda/4.6.8 requests/2.18.4 CPython/3.6.7 Darwin/18.2.0 OSX/10.14.3 UID:GID : 501:20 netrc file : None offline mode : False ```
ocefpaf commented 5 years ago

A fix for it will land soon. Hold on...

andersonsam commented 5 years ago

Any updates on this?

ocefpaf commented 5 years ago

It was fixed a while back. I guess we forgot to close the issue.

nonoumasy commented 5 years ago

I'm still getting this issue

ImportError Traceback (most recent call last)

in ----> 1 import geopandas as gpd 2 import matplotlib.pyplot as plt 3 import ipywidgets as widgets 4 from ipywidgets import interact 5 //anaconda3/lib/python3.7/site-packages/geopandas/__init__.py in 3 from geopandas.geodataframe import points_from_xy 4 ----> 5 from geopandas.io.file import read_file 6 from geopandas.io.sql import read_postgis 7 from geopandas.tools import sjoin //anaconda3/lib/python3.7/site-packages/geopandas/io/file.py in 2 from distutils.version import LooseVersion 3 ----> 4 import fiona 5 import numpy as np 6 //anaconda3/lib/python3.7/site-packages/fiona/__init__.py in 81 os.environ["PATH"] = os.environ["PATH"] + ";" + libdir 82 ---> 83 from fiona.collection import BytesCollection, Collection 84 from fiona.drvsupport import supported_drivers 85 from fiona.env import ensure_env_with_credentials, Env //anaconda3/lib/python3.7/site-packages/fiona/collection.py in 7 8 from fiona import compat, vfs ----> 9 from fiona.ogrext import Iterator, ItemsIterator, KeysIterator 10 from fiona.ogrext import Session, WritingSession 11 from fiona.ogrext import buffer_to_virtual_file, remove_virtual_file, GEOMETRY_TYPES ImportError: dlopen(//anaconda3/lib/python3.7/site-packages/fiona/ogrext.cpython-37m-darwin.so, 2): Library not loaded: @rpath/libgif.7.dylib Referenced from: //anaconda3/lib/libgdal.20.dylib Reason: image not found --------------------------------------------------------------------------- # packages in environment at //anaconda3: # # Name Version Build Channel _ipyw_jlab_nb_ext_conf 0.1.0 py37_0 alabaster 0.7.12 py37_0 anaconda 2019.07 py37_0 anaconda-client 1.7.2 py37_0 anaconda-navigator 1.9.7 py37_0 anaconda-project 0.8.3 py_0 appnope 0.1.0 py37_0 appscript 1.1.0 py37h1de35cc_0 asn1crypto 0.24.0 py37_0 astroid 2.2.5 py37_0 astropy 3.2.1 py37h1de35cc_0 atomicwrites 1.3.0 py37_1 attrs 19.1.0 py37_1 babel 2.7.0 py_0 backcall 0.1.0 py37_0 backports 1.0 py_2 backports.functools_lru_cache 1.5 py_2 backports.os 0.1.1 py37_0 backports.shutil_get_terminal_size 1.0.0 py37_2 backports.tempfile 1.0 py_1 backports.weakref 1.0.post1 py_1 beautifulsoup4 4.7.1 py37_1 bitarray 0.9.3 py37h1de35cc_0 bkcharts 0.2 py37_0 blas 1.0 mkl bleach 3.1.0 py37_0 blosc 1.16.3 hd9629dc_0 bokeh 1.2.0 py37_0 boost-cpp 1.70.0 hd59e818_1 conda-forge boto 2.49.0 py37_0 bottleneck 1.2.1 py37h1d22016_1 bzip2 1.0.8 h1de35cc_0 ca-certificates 2019.5.15 0 cairo 1.14.12 h9d4d9ac_1005 conda-forge certifi 2019.6.16 py37_0 conda-forge cffi 1.12.3 py37hb5b8e2f_0 chardet 3.0.4 py37_1 click 7.0 py37_0 click-plugins 1.1.1 py_0 conda-forge cligj 0.5.0 py_0 conda-forge cloudpickle 1.2.1 py_0 clyent 1.2.2 py37_1 colorama 0.4.1 py37_0 conda 4.7.10 py37_0 conda-forge conda-build 3.18.8 py37_0 conda-env 2.6.0 1 conda-package-handling 1.3.11 py37_0 conda-verify 3.4.2 py_1 contextlib2 0.5.5 py37_0 cryptography 2.7 py37ha12b0ac_0 curl 7.65.2 ha441bb4_0 cycler 0.10.0 py37_0 cython 0.29.12 py37h0a44026_0 cytoolz 0.10.0 py37h1de35cc_0 dask 2.1.0 py_0 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intel-openmp 2019.4 233 ipykernel 5.1.1 py37h39e3cac_0 ipython 7.6.1 py37h39e3cac_0 ipython_genutils 0.2.0 py37_0 ipywidgets 7.5.0 py_0 isort 4.3.21 py37_0 itsdangerous 1.1.0 py37_0 jbig 2.1 h4d881f8_0 jdcal 1.4.1 py_0 jedi 0.13.3 py37_0 jinja2 2.10.1 py37_0 joblib 0.13.2 py37_0 jpeg 9b he5867d9_2 json-c 0.13.1 h1de35cc_1001 conda-forge json5 0.8.4 py_0 jsonschema 3.0.1 py37_0 jupyter 1.0.0 py37_7 jupyter_client 5.3.1 py_0 jupyter_console 6.0.0 py37_0 jupyter_core 4.5.0 py_0 jupyterlab 1.0.2 py37hf63ae98_0 jupyterlab_server 1.0.0 py_0 kealib 1.4.10 hecf890f_1003 conda-forge keyring 18.0.0 py37_0 kiwisolver 1.1.0 py37h0a44026_0 krb5 1.16.1 hddcf347_7 lazy-object-proxy 1.4.1 py37h1de35cc_0 libarchive 3.3.3 h786848e_5 libcurl 7.65.2 h051b688_0 libcxx 4.0.1 hcfea43d_1 libcxxabi 4.0.1 hcfea43d_1 libdap4 3.19.1 h3d3e54a_0 libedit 3.1.20181209 hb402a30_0 libffi 3.2.1 h475c297_4 libgdal 2.3.3 h0950a36_0 libgfortran 3.0.1 h93005f0_2 libiconv 1.15 hdd342a3_7 libkml 1.3.0 hed7d534_1010 conda-forge liblief 0.9.0 h2a1bed3_2 libnetcdf 4.6.1 hd5207e6_2 libpng 1.6.37 ha441bb4_0 libpq 11.2 h051b688_0 libsodium 1.0.16 h3efe00b_0 libspatialindex 1.9.0 h6de7cb9_1 conda-forge libspatialite 4.3.0a h0cd9627_1026 conda-forge libssh2 1.8.2 ha12b0ac_0 libtiff 4.0.10 hcb84e12_2 libxml2 2.9.9 hf6e021a_1 libxslt 1.1.33 h33a18ac_0 llvm-openmp 4.0.1 hcfea43d_1 llvmlite 0.29.0 py37h98b8051_0 locket 0.2.0 py37_1 lxml 4.3.4 py37hef8c89e_0 lz4-c 1.8.1.2 h1de35cc_0 lzo 2.10 h362108e_2 markupsafe 1.1.1 py37h1de35cc_0 matplotlib 3.1.0 py37h54f8f79_0 mccabe 0.6.1 py37_1 mistune 0.8.4 py37h1de35cc_0 mkl 2019.4 233 mkl-service 2.0.2 py37h1de35cc_0 mkl_fft 1.0.12 py37h5e564d8_0 mkl_random 1.0.2 py37h27c97d8_0 mock 3.0.5 py37_0 more-itertools 7.0.0 py37_0 mpc 1.1.0 h6ef4df4_1 mpfr 4.0.1 h3018a27_3 mpmath 1.1.0 py37_0 msgpack-python 0.6.1 py37h04f5b5a_1 multipledispatch 0.6.0 py37_0 munch 2.3.2 py_0 conda-forge navigator-updater 0.2.1 py37_0 nbconvert 5.5.0 py_0 nbformat 4.4.0 py37_0 ncurses 6.1 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pycodestyle 2.5.0 py37_0 pycosat 0.6.3 py37h1de35cc_0 pycparser 2.19 py37_0 pycrypto 2.6.1 py37h1de35cc_9 pycurl 7.43.0.3 py37ha12b0ac_0 pyflakes 2.1.1 py37_0 pygments 2.4.2 py_0 pylint 2.3.1 py37_0 pyodbc 4.0.26 py37h0a44026_0 pyopenssl 19.0.0 py37_0 pyparsing 2.4.0 py_0 pyproj 1.9.6 py37h01d97ff_1002 conda-forge pyqt 5.9.2 py37h655552a_2 pyrsistent 0.14.11 py37h1de35cc_0 pysocks 1.7.0 py37_0 pytables 3.5.2 py37h5bccee9_1 pytest 5.0.1 py37_0 pytest-arraydiff 0.3 py37h39e3cac_0 pytest-astropy 0.5.0 py37_0 pytest-doctestplus 0.3.0 py37_0 pytest-openfiles 0.3.2 py37_0 pytest-remotedata 0.3.1 py37_0 python 3.7.3 h359304d_0 python-dateutil 2.8.0 py37_0 python-libarchive-c 2.8 py37_11 python.app 2 py37_9 pytz 2019.1 py_0 pywavelets 1.0.3 py37h1d22016_1 pyyaml 5.1.1 py37h1de35cc_0 pyzmq 18.0.0 py37h0a44026_0 qt 5.9.7 h468cd18_1 qtawesome 0.5.7 py37_1 qtconsole 4.5.1 py_0 qtpy 1.8.0 py_0 readline 7.0 h1de35cc_5 requests 2.22.0 py37_0 rope 0.14.0 py_0 rtree 0.8.3 py37h666c49c_1002 conda-forge 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ha441bb4_0 toolz 0.10.0 py_0 tornado 6.0.3 py37h1de35cc_0 tqdm 4.32.1 py_0 traitlets 4.3.2 py37_0 unicodecsv 0.14.1 py37_0 unixodbc 2.3.7 h1de35cc_0 urllib3 1.24.2 py37_0 wcwidth 0.1.7 py37_0 webencodings 0.5.1 py37_1 werkzeug 0.15.4 py_0 wheel 0.33.4 py37_0 widgetsnbextension 3.5.0 py37_0 wrapt 1.11.2 py37h1de35cc_0 wurlitzer 1.0.2 py37_0 xerces-c 3.2.2 h4db8090_1003 conda-forge xlrd 1.2.0 py37_0 xlsxwriter 1.1.8 py_0 xlwings 0.15.8 py37_0 xlwt 1.3.0 py37_0 xz 5.2.4 h1de35cc_4 yaml 0.1.7 hc338f04_2 zeromq 4.3.1 h0a44026_3 zict 1.0.0 py_0 zipp 0.5.1 py_0 zlib 1.2.11 h1de35cc_3 zstd 1.3.7 h5bba6e5_0
ocefpaf commented 5 years ago

I'm still getting this issue

@nonoumasy see https://conda-forge.org/docs/user/tipsandtricks.html#how-to-fix-it

Also, do not comment on a closed issue. Please open a new one.