conda-forge / gstreamer-feedstock

A conda-smithy repository for gstreamer.
BSD 3-Clause "New" or "Revised" License
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error when updating #48

Closed chapochn closed 3 years ago

chapochn commented 3 years ago

when I upload some packages conda update -c conda-forge mne I get this error:

InvalidArchiveError("Error with archive /home/nmc/Programs/anaconda3/pkgs/gstreamer-1.18.2-ha23517c_0.tar.bz2. You probably need to delete and re-download or re-create this file. Message from libarchive was:\n\nFailed to create dir 'share/gdb/auto-load/home/conda/feedstock_root/build_artifacts/gstreamer_and_plugins_1607343170771/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold'")

conda list packages in environment at /home/nmc/Programs/anaconda3/envs/mne:

Name Version Build Channel _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 1_gnu conda-forge appdirs 1.4.3 py_1 conda-forge apptools 4.5.0 py_0 conda-forge blosc 1.20.0 he1b5a44_0 conda-forge bzip2 1.0.8 h516909a_3 conda-forge c-ares 1.16.1 h516909a_3 conda-forge ca-certificates 2020.6.20 hecda079_0 conda-forge certifi 2020.6.20 py38h32f6830_0 conda-forge cftime 1.2.1 py38h8790de6_0 conda-forge configobj 5.0.6 py_0 conda-forge curl 7.71.1 he644dc0_5 conda-forge cvxopt 1.2.5 py38hf48cded_1 conda-forge cycler 0.10.0 py_2 conda-forge dbus 1.13.6 he372182_0 conda-forge dipy 1.1.0 py38hc1659b7_1 conda-forge dsdp 5.8 h23d7751_1203 conda-forge envisage 4.9.2 py_0 conda-forge expat 2.2.9 he1b5a44_2 conda-forge fftw 3.3.8 nompi_h7f3a6c3_1111 conda-forge fontconfig 2.13.1 h1056068_1002 conda-forge freetype 2.10.2 he06d7ca_0 conda-forge future 0.18.2 py38h32f6830_1 conda-forge gettext 0.19.8.1 hc5be6a0_1002 conda-forge glib 2.65.0 h6f030ca_0 conda-forge glpk 4.65 he80fd80_1002 conda-forge gmp 6.2.0 he1b5a44_2 conda-forge gsl 2.6 h294904e_0 conda-forge gst-plugins-base 1.14.5 h0935bb2_2 conda-forge gstreamer 1.14.5 h36ae1b5_2 conda-forge h5py 2.10.0 nompi_py38hfb01d0b_104 conda-forge hdf4 4.2.13 hf30be14_1003 conda-forge hdf5 1.10.6 nompi_h3c11f04_101 conda-forge hdf5storage 0.1.15 py_1 conda-forge icu 67.1 he1b5a44_0 conda-forge imageio 2.9.0 py_0 conda-forge joblib 0.16.0 py_0 conda-forge jpeg 9d h516909a_0 conda-forge jsoncpp 1.8.4 hc9558a2_1002 conda-forge kiwisolver 1.2.0 py38hbf85e49_0 conda-forge krb5 1.17.1 hfafb76e_3 conda-forge lcms2 2.11 hbd6801e_0 conda-forge ld_impl_linux-64 2.34 hc38a660_9 conda-forge libblas 3.8.0 17_openblas conda-forge libcblas 3.8.0 17_openblas conda-forge libclang 10.0.1 default_hde54327_1 conda-forge libcurl 7.71.1 hcdd3856_5 conda-forge libedit 3.1.20191231 he28a2e2_2 conda-forge libev 4.33 h516909a_1 conda-forge libevent 2.1.10 hcdb4288_2 conda-forge libffi 3.2.1 he1b5a44_1007 conda-forge libgcc-ng 9.3.0 h24d8f2e_16 conda-forge libgfortran-ng 7.5.0 hdf63c60_16 conda-forge libgomp 9.3.0 h24d8f2e_16 conda-forge libiconv 1.16 h516909a_0 conda-forge liblapack 3.8.0 17_openblas conda-forge libllvm10 10.0.1 he513fc3_3 conda-forge libnetcdf 4.7.4 nompi_h84807e1_105 conda-forge libnghttp2 1.41.0 h8cfc5f6_2 conda-forge libopenblas 0.3.10 pthreads_hb3c22a3_4 conda-forge libpng 1.6.37 hed695b0_2 conda-forge libpq 12.3 h5513abc_0 conda-forge libssh2 1.9.0 hab1572f_5 conda-forge libstdcxx-ng 9.3.0 hdf63c60_16 conda-forge libtiff 4.1.0 hc7e4089_6 conda-forge libuuid 2.32.1 h14c3975_1000 conda-forge libwebp-base 1.1.0 h516909a_3 conda-forge libxcb 1.13 h14c3975_1002 conda-forge libxkbcommon 0.10.0 he1b5a44_0 conda-forge libxml2 2.9.10 h68273f3_2 conda-forge llvmlite 0.34.0 py38h4f45e52_1 conda-forge lz4-c 1.9.2 he1b5a44_3 conda-forge lzo 2.10 h516909a_1000 conda-forge matplotlib-base 3.3.1 py38h91b0d89_1 conda-forge mayavi 4.7.2 py38hda7c5db_0 conda-forge meshio 4.1.1 py_0 conda-forge metis 5.1.0 he1b5a44_1006 conda-forge mne 0.20.8 py38h32f6830_0 conda-forge mock 4.0.2 py38h32f6830_0 conda-forge mysql-common 8.0.21 0 conda-forge mysql-libs 8.0.21 hf3661c5_0 conda-forge ncurses 6.2 he1b5a44_1 conda-forge netcdf4 1.5.4 nompi_py38hec8b9af_102 conda-forge nibabel 3.1.1 py_0 conda-forge nilearn 0.6.2 pyh5ca1d4c_0 conda-forge nspr 4.28 he1b5a44_0 conda-forge nss 3.56 he751ad9_0 conda-forge numba 0.51.2 py38hc5bc63f_0 conda-forge numexpr 2.7.1 py38hcb8c335_1 conda-forge numpy 1.19.1 py38hbc27379_2 conda-forge olefile 0.46 py_0 conda-forge openssl 1.1.1g h516909a_1 conda-forge packaging 20.4 pyh9f0ad1d_0 conda-forge pandas 1.1.1 py38h950e882_0 conda-forge patsy 0.5.1 py_0 conda-forge pcre 8.44 he1b5a44_0 conda-forge pillow 7.2.0 py38h9776b28_1 conda-forge pip 20.2.2 py_0 conda-forge psutil 5.7.2 py38h1e0a361_0 conda-forge pthread-stubs 0.4 h14c3975_1001 conda-forge pydicom 2.0.0 pyh9f0ad1d_0 conda-forge pyface 7.0.0 pyh9f0ad1d_1 conda-forge pygments 2.6.1 py_0 conda-forge pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge pyqt 5.12.3 py38ha8c2ead_3 conda-forge pyqt5-sip 4.19.18 pypi_0 pypi pyqtchart 5.12 pypi_0 pypi pyqtwebengine 5.12.1 pypi_0 pypi pysurfer 0.11.0 py_0 conda-forge pytables 3.6.1 py38h1b207d3_2 conda-forge python 3.8.5 h1103e12_7_cpython conda-forge python-dateutil 2.8.1 py_0 conda-forge python-picard 0.4 pyh5ca1d4c_1 conda-forge python_abi 3.8 1_cp38 conda-forge pytz 2020.1 pyh9f0ad1d_0 conda-forge pyvista 0.25.3 py_0 conda-forge qt 5.12.9 h1f2b2cb_0 conda-forge readline 8.0 he28a2e2_2 conda-forge scikit-learn 0.23.2 py38hee58b96_0 conda-forge scipy 1.5.2 py38h8c5af15_0 conda-forge scooby 0.5.6 pyh9f0ad1d_0 conda-forge setuptools 49.6.0 py38h32f6830_0 conda-forge six 1.15.0 pyh9f0ad1d_0 conda-forge sqlite 3.33.0 h4cf870e_0 conda-forge statsmodels 0.12.0 py38h1e0a361_0 conda-forge suitesparse 5.7.2 h717dc36_0 conda-forge tbb 2020.2 hc9558a2_0 conda-forge threadpoolctl 2.1.0 pyh5ca1d4c_0 conda-forge tk 8.6.10 hed695b0_0 conda-forge tornado 6.0.4 py38h1e0a361_1 conda-forge tqdm 4.48.2 pyh9f0ad1d_0 conda-forge traits 6.1.0 py38h1e0a361_0 conda-forge traitsui 7.0.1 pyh9f0ad1d_0 conda-forge vtk 8.2.0 py38hf2e56f5_218 conda-forge wheel 0.35.1 pyh9f0ad1d_0 conda-forge xlrd 1.2.0 pyh9f0ad1d_1 conda-forge xorg-kbproto 1.0.7 h14c3975_1002 conda-forge xorg-libice 1.0.10 h516909a_0 conda-forge xorg-libsm 1.2.3 h84519dc_1000 conda-forge xorg-libx11 1.6.12 h516909a_0 conda-forge xorg-libxau 1.0.9 h14c3975_0 conda-forge xorg-libxdmcp 1.1.3 h516909a_0 conda-forge xorg-libxt 1.2.0 h516909a_0 conda-forge xorg-xproto 7.0.31 h14c3975_1007 conda-forge xz 5.2.5 h516909a_1 conda-forge zlib 1.2.11 h516909a_1009 conda-forge zstd 1.4.5 h6597ccf_2 conda-forge

conda info active environment : mne active env location : /home/nmc/Programs/anaconda3/envs/mne shell level : 2 user config file : /home/nmc/.condarc populated config files : conda version : 4.9.2 conda-build version : 3.18.11 python version : 3.8.3.final.0 virtual packages : glibc=2.31=0 unix=0=0 __archspec=1=x86_64 base environment : /home/nmc/Programs/anaconda3 (writable) channel URLs : https://repo.anaconda.com/pkgs/main/linux-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/linux-64 https://repo.anaconda.com/pkgs/r/noarch package cache : /home/nmc/Programs/anaconda3/pkgs /home/nmc/.conda/pkgs envs directories : /home/nmc/Programs/anaconda3/envs /home/nmc/.conda/envs platform : linux-64 user-agent : conda/4.9.2 requests/2.24.0 CPython/3.8.3 Linux/5.4.0-58-generic ubuntu/20.04.1 glibc/2.31 UID:GID : 1002:1002 netrc file : None offline mode : False

Was not sure where to report this. Thank you for your help and let me know what additional detail you need.

tito commented 3 years ago

Yep, same issue here, the archive have build artifacts inside that make it uninstallable on encrypted/mounted directory:

share/gdb/auto-load/home/conda/feedstock_root/build_artifacts/gstreamer_and_plugins_1607343170771/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold/lib/pycache/libgstreamer-1.0.so.0.1802.0-gdb.cpython-39.pyc

This should not be in the archive

tschoonj commented 3 years ago

Thanks for reporting this issue. #49 should fix it.