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conda-forge / libxcb-feedstock

A conda-smithy repository for libxcb.
BSD 3-Clause "New" or "Revised" License
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Bad files in package osx-arm64/libxcb-1.16-hf2054a2_0.conda #21

Closed cdeil closed 2 months ago

cdeil commented 2 months ago

Solution to issue cannot be found in the documentation.

Issue

This file: https://conda.anaconda.org/conda-forge/osx-arm64/libxcb-1.16-hf2054a2_0.conda

contains some py 3.10 pyc files that land in a py 3.11 site-packages folder from a py 3.12 conda install:

    "lib/python3.11/site-packages/xcbgen/__pycache__/__init__.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/align.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/error.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/expr.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/matcher.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/state.cpython-310.pyc",
    "lib/python3.11/site-packages/xcbgen/__pycache__/xtypes.cpython-310.pyc"

Full content: https://gist.github.com/cdeil/7a007603c5c2d8e77c99accd56ad16ef#file-libxcb-1-16-hf2054a2_0-conda-L131-L137

Can you please build a new package to fix this?

Installed packages

(base) panel $ eval "$(pixi shell-hook)"                                             
(base) panel $ which python
/Users/cdeil/code/oss/panel/.pixi/envs/default/bin/python
(base) panel $ conda list
# packages in environment at /Users/cdeil/code/oss/panel/.pixi/envs/default:
#
# Name                    Version                   Build  Channel
anyio                     4.4.0              pyhd8ed1ab_0    conda-forge
appnope                   0.1.4              pyhd8ed1ab_0    conda-forge
argon2-cffi               23.1.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py312h02f2b3b_4    conda-forge
arrow                     1.3.0              pyhd8ed1ab_0    conda-forge
asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
async-lru                 2.0.4              pyhd8ed1ab_0    conda-forge
attrs                     24.2.0             pyh71513ae_0    conda-forge
babel                     2.14.0             pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.12.3             pyha770c72_0    conda-forge
bleach                    6.1.0              pyhd8ed1ab_0    conda-forge
bokeh                     3.5.1                      py_0    bokeh
bokeh_sampledata          2024.2             pyhd8ed1ab_0    conda-forge
brotli                    1.1.0                hb547adb_1    conda-forge
brotli-bin                1.1.0                hb547adb_1    conda-forge
brotli-python             1.1.0           py312h9f69965_1    conda-forge
bzip2                     1.0.8                h99b78c6_7    conda-forge
ca-certificates           2024.7.4             hf0a4a13_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
certifi                   2024.7.4           pyhd8ed1ab_0    conda-forge
cffi                      1.17.0          py312h80c9ed6_0    conda-forge
charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
colorcet                  3.1.0                      py_0    pyviz/label/dev
comm                      0.2.2              pyhd8ed1ab_0    conda-forge
contourpy                 1.2.1           py312h0fef576_0    conda-forge
cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
debugpy                   1.8.5           py312h5c2e7bc_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
exceptiongroup            1.2.2              pyhd8ed1ab_0    conda-forge
executing                 2.0.1              pyhd8ed1ab_0    conda-forge
fonttools                 4.53.1          py312h7e5086c_0    conda-forge
fqdn                      1.5.1              pyhd8ed1ab_0    conda-forge
freetype                  2.12.1               hadb7bae_2    conda-forge
h11                       0.14.0             pyhd8ed1ab_0    conda-forge
h2                        4.1.0              pyhd8ed1ab_0    conda-forge
holoviews                 1.19.2a0                   py_0    pyviz/label/dev
hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
httpcore                  1.0.5              pyhd8ed1ab_0    conda-forge
httpx                     0.27.0             pyhd8ed1ab_0    conda-forge
hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
icalendar                 5.0.13             pyhd8ed1ab_0    conda-forge
icu                       73.2                 hc8870d7_0    conda-forge
idna                      3.7                pyhd8ed1ab_0    conda-forge
importlib-metadata        8.2.0              pyha770c72_0    conda-forge
importlib_metadata        8.2.0                hd8ed1ab_0    conda-forge
importlib_resources       6.4.0              pyhd8ed1ab_0    conda-forge
ipykernel                 6.29.5             pyh57ce528_0    conda-forge
ipython                   8.26.0             pyh707e725_0    conda-forge
isoduration               20.11.0            pyhd8ed1ab_0    conda-forge
jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
jinja2                    3.1.4              pyhd8ed1ab_0    conda-forge
json5                     0.9.25             pyhd8ed1ab_0    conda-forge
jsonpointer               3.0.0           py312h81bd7bf_0    conda-forge
jsonschema                4.23.0             pyhd8ed1ab_0    conda-forge
jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
jsonschema-with-format-nongpl 4.23.0               hd8ed1ab_0    conda-forge
jupyter-lsp               2.2.5              pyhd8ed1ab_0    conda-forge
jupyter_client            8.6.2              pyhd8ed1ab_0    conda-forge
jupyter_core              5.7.2           py312h81bd7bf_0    conda-forge
jupyter_events            0.10.0             pyhd8ed1ab_0    conda-forge
jupyter_server            2.14.2             pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.5.3              pyhd8ed1ab_0    conda-forge
jupyterlab                4.2.4              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.3.0              pyhd8ed1ab_1    conda-forge
jupyterlab_server         2.27.3             pyhd8ed1ab_0    conda-forge
kiwisolver                1.4.5           py312h389731b_1    conda-forge
krb5                      1.21.3               h237132a_0    conda-forge
lcms2                     2.16                 ha0e7c42_0    conda-forge
lerc                      4.0.0                h9a09cb3_0    conda-forge
libblas                   3.9.0           23_osxarm64_openblas    conda-forge
libbrotlicommon           1.1.0                hb547adb_1    conda-forge
libbrotlidec              1.1.0                hb547adb_1    conda-forge
libbrotlienc              1.1.0                hb547adb_1    conda-forge
libcblas                  3.9.0           23_osxarm64_openblas    conda-forge
libcxx                    18.1.8               h5a72898_2    conda-forge
libdeflate                1.21                 h99b78c6_0    conda-forge
libedit                   3.1.20191231         hc8eb9b7_2    conda-forge
libexpat                  2.6.2                hebf3989_0    conda-forge
libffi                    3.4.2                h3422bc3_5    conda-forge
libgfortran               5.0.0           13_2_0_hd922786_3    conda-forge
libgfortran5              13.2.0               hf226fd6_3    conda-forge
libjpeg-turbo             3.0.0                hb547adb_1    conda-forge
liblapack                 3.9.0           23_osxarm64_openblas    conda-forge
libopenblas               0.3.27          openmp_h517c56d_1    conda-forge
libpng                    1.6.43               h091b4b1_0    conda-forge
libsodium                 1.0.18               h27ca646_1    conda-forge
libsqlite                 3.46.0               hfb93653_0    conda-forge
libtiff                   4.6.0                hf8409c0_4    conda-forge
libuv                     1.48.0               h93a5062_0    conda-forge
libwebp-base              1.4.0                h93a5062_0    conda-forge
libxcb                    1.16                 hf2054a2_0    conda-forge
libzlib                   1.3.1                hfb2fe0b_1    conda-forge
linkify-it-py             2.0.3              pyhd8ed1ab_0    conda-forge
llvm-openmp               18.1.8               hde57baf_0    conda-forge
markdown                  3.6                pyhd8ed1ab_0    conda-forge
markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.5           py312he37b823_0    conda-forge
matplotlib-base           3.9.1           py312h32d6e5a_2    conda-forge
matplotlib-inline         0.1.7              pyhd8ed1ab_0    conda-forge
mdit-py-plugins           0.4.1              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
mistune                   3.0.2              pyhd8ed1ab_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
nbclient                  0.10.0             pyhd8ed1ab_0    conda-forge
nbconvert-core            7.16.4             pyhd8ed1ab_1    conda-forge
nbformat                  5.10.4             pyhd8ed1ab_0    conda-forge
ncurses                   6.5                  hb89a1cb_0    conda-forge
nest-asyncio              1.6.0              pyhd8ed1ab_0    conda-forge
nodejs                    22.5.1               h3fe1c63_0    conda-forge
nomkl                     1.0                  h5ca1d4c_0    conda-forge
notebook-shim             0.2.4              pyhd8ed1ab_0    conda-forge
numpy                     1.26.4          py312h8442bc7_0    conda-forge
openjpeg                  2.5.2                h9f1df11_0    conda-forge
openssl                   3.3.1                hfb2fe0b_2    conda-forge
overrides                 7.7.0              pyhd8ed1ab_0    conda-forge
packaging                 24.1               pyhd8ed1ab_0    conda-forge
pandas                    2.2.2           py312h8ae5369_1    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
panel                     1.5.0b4.post1.dev13+g32db5e0a.d20240819          pypi_0    pypi
param                     2.1.1                      py_0    pyviz/label/dev
parso                     0.8.4              pyhd8ed1ab_0    conda-forge
pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    10.4.0          py312h39b1d8d_0    conda-forge
pip                       24.2               pyhd8ed1ab_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
platformdirs              4.2.2              pyhd8ed1ab_0    conda-forge
plotly                    5.23.0             pyhd8ed1ab_0    conda-forge
prometheus_client         0.20.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.47             pyha770c72_0    conda-forge
psutil                    6.0.0           py312h7e5086c_0    conda-forge
pthread-stubs             0.4               h27ca646_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pure_eval                 0.2.3              pyhd8ed1ab_0    conda-forge
pycparser                 2.22               pyhd8ed1ab_0    conda-forge
pygments                  2.18.0             pyhd8ed1ab_0    conda-forge
pyobjc-core               10.3.1          py312hbb55c70_0    conda-forge
pyobjc-framework-cocoa    10.3.1          py312hbb55c70_0    conda-forge
pyparsing                 3.1.2              pyhd8ed1ab_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
python                    3.12.5          h30c5eda_0_cpython    conda-forge
python-dateutil           2.9.0              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.20.0             pyhd8ed1ab_0    conda-forge
python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
python-tzdata             2024.1             pyhd8ed1ab_0    conda-forge
python_abi                3.12                    4_cp312    conda-forge
pytz                      2024.1             pyhd8ed1ab_0    conda-forge
pyviz_comms               3.0.0                      py_0    pyviz/label/dev
pyyaml                    6.0.2           py312h7e5086c_0    conda-forge
pyzmq                     26.1.0          py312hfa13136_0    conda-forge
qhull                     2020.2               h420ef59_5    conda-forge
readline                  8.2                  h92ec313_1    conda-forge
referencing               0.35.1             pyhd8ed1ab_0    conda-forge
requests                  2.32.3             pyhd8ed1ab_0    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
rpds-py                   0.20.0          py312h552d48e_0    conda-forge
send2trash                1.8.3              pyh31c8845_0    conda-forge
setuptools                72.1.0             pyhd8ed1ab_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sniffio                   1.3.1              pyhd8ed1ab_0    conda-forge
soupsieve                 2.5                pyhd8ed1ab_1    conda-forge
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
tenacity                  9.0.0              pyhd8ed1ab_0    conda-forge
terminado                 0.18.1             pyh31c8845_0    conda-forge
tinycss2                  1.3.0              pyhd8ed1ab_0    conda-forge
tk                        8.6.13               h5083fa2_1    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
tornado                   6.4.1           py312h7e5086c_0    conda-forge
tqdm                      4.66.5             pyhd8ed1ab_0    conda-forge
traitlets                 5.14.3             pyhd8ed1ab_0    conda-forge
types-python-dateutil     2.9.0.20240316     pyhd8ed1ab_0    conda-forge
typing-extensions         4.12.2               hd8ed1ab_0    conda-forge
typing_extensions         4.12.2             pyha770c72_0    conda-forge
typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
tzdata                    2024a                h0c530f3_0    conda-forge
uc-micro-py               1.0.3              pyhd8ed1ab_0    conda-forge
uri-template              1.3.0              pyhd8ed1ab_0    conda-forge
urllib3                   2.2.2              pyhd8ed1ab_1    conda-forge
watchfiles                0.23.0          py312h552d48e_0    conda-forge
wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
webcolors                 24.6.0             pyhd8ed1ab_0    conda-forge
webencodings              0.5.1              pyhd8ed1ab_2    conda-forge
websocket-client          1.8.0              pyhd8ed1ab_0    conda-forge
wheel                     0.44.0             pyhd8ed1ab_0    conda-forge
xorg-libxau               1.0.11               hb547adb_0    conda-forge
xorg-libxdmcp             1.1.3                h27ca646_0    conda-forge
xyzservices               2024.6.0           pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h57fd34a_0    conda-forge
yaml                      0.2.5                h3422bc3_2    conda-forge
zeromq                    4.3.5                hcc0f68c_4    conda-forge
zipp                      3.19.2             pyhd8ed1ab_0    conda-forge
zlib                      1.3.1                hfb2fe0b_1    conda-forge
zstandard                 0.23.0          py312h721a963_0    conda-forge
zstd                      1.5.6                hb46c0d2_0    conda-forge

Environment info

(base) panel $ conda info

     active environment : /Users/cdeil/code/oss/panel/.pixi/envs/default
    active env location : /Users/cdeil/code/oss/panel/.pixi/envs/default
            shell level : 1
       user config file : /Users/cdeil/.condarc
 populated config files : 
          conda version : 24.5.0
    conda-build version : 24.5.1
         python version : 3.12.4.final.0
                 solver : libmamba (default)
       virtual packages : __archspec=1=m1
                          __conda=24.5.0=0
                          __osx=14.6.1=0
                          __unix=0=0
       base environment : /opt/anaconda3  (writable)
      conda av data dir : /opt/anaconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/osx-arm64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/osx-arm64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /opt/anaconda3/pkgs
                          /Users/cdeil/.conda/pkgs
       envs directories : /opt/anaconda3/envs
                          /Users/cdeil/.conda/envs
               platform : osx-arm64
             user-agent : conda/24.5.0 requests/2.32.2 CPython/3.12.4 Darwin/23.6.0 OSX/14.6.1 solver/libmamba conda-libmamba-solver/24.1.0 libmambapy/1.5.8 aau/0.4.4 c/. s/. e/.
                UID:GID : 501:20
             netrc file : None
           offline mode : False
pkgw commented 2 months ago

Whoa, weird. As far as I can tell, this only affects the osx-arm64 package.

I don't see anything in the build logs that gives any hints about what's going on here. Probably the most pragmatic solution would be to add an rm -rf at the end of the package build script to just make these files go away.

pkgw commented 2 months ago

Filed #22 about this.

Weirdly the xcbgen site-packages directory in the osx-arm64 build gets stocked with .py files as well as the __pycache__ stuff, but it appears that they don't make it into the actual package. And none of this seems to appear in packages for other platforms. I'm guessing that it's some strange consequence of the cross-build Python setup with some macOS-specific peculiarity, but I don't have any specific explanation.

pkgw commented 2 months ago

Hopefully the new builds triggered by #22 will address this.

cdeil commented 2 months ago

@pkgw - thank you very much!

Your #22 resolved the issue.

When installing now on MacOS I get https://anaconda.org/conda-forge/libxcb/1.16/download/osx-arm64/libxcb-1.16-hc9fafa5_1.conda without these rogue files.