Open peterjc opened 1 week ago
Confirmed the same behaviour on Intel Linux, and that installing perl-ipc-run
fixes this. PR to follow.
Short term workaround (unless using ARM), install perl-ipc-run
from BioConda.
Actual fix:
Migrate perl-ipc-run
from bioconda to conda-forge - see https://github.com/bioconda/bioconda-recipes/blob/master/recipes/perl-ipc-run/meta.yaml (looks like pure Perl with no C code dependency, so should be fine on ARM too).
Declare the moreutils
dependency, see #7
Update perl-io-tty
to build on ARM - https://github.com/conda-forge/perl-io-tty-feedstock/
Solution to issue cannot be found in the documentation.
Issue
Noticed on macOS Intel, confirmed on macOS ARM.
The chronic command fails, e.g. expected output (nothing):
Problematic behaviour:
This looks like a missing dependency:
I will try installing
perl-ipc-run
on Intel macOS shortly, however this in turn requiresperl-io-tty
which is not available on macOS ARM yet. If adding this dependency solves this, I will submit a pull request shortly - and also expand the tests to include the above trivial example.Installed packages
Environment info