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conda-forge / python-igraph-feedstock

A conda-smithy repository for python-igraph.
BSD 3-Clause "New" or "Revised" License
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Support icu67 #33

Closed alienzj closed 4 years ago

alienzj commented 4 years ago

Issue:

Python 3.7.8 | packaged by conda-forge | (default, Jul 23 2020, 03:53:36)
[GCC 7.5.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import igraph
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/ldfssz1/ST_META/share/User/zhujie/.conda/envs/bioenv/lib/python3.7/site-packages/igraph/__init__.py", line 34, in <module>
from igraph._igraph import *
ImportError: libicui18n.so.58: cannot open shared object file: No such file or directory
>>>

Could we let igraph support icu67 ?


Environment (conda list):

``` $ conda list # packages in environment at /ldfssz1/ST_META/share/User/zhujie/.conda/envs/bioenv3.7: # # Name Version Build Channel _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 0_gnu conda-forge _r-mutex 1.0.1 anacondar_1 conda-forge _sysroot_linux-64_curr_repodata_hack 3 ha9d2b57_9 conda-forge _tflow_select 2.3.0 mkl defaults abseil-cpp 20200225.2 he1b5a44_2 conda-forge absl-py 0.9.0 py37hc8dfbb8_1 conda-forge adal 1.2.4 pyh9f0ad1d_0 conda-forge aioeasywebdav 2.4.0 py37_1000 conda-forge aiohttp 3.6.2 py37h516909a_0 conda-forge alsa-lib 1.2.3 h516909a_0 conda-forge anaconda-client 1.7.2 py37_0 defaults ansiwrap 0.8.4 py_0 conda-forge appdirs 1.4.3 py_1 conda-forge aragorn 1.2.38 h516909a_3 bioconda argh 0.26.2 py37_1001 conda-forge arrow-cpp 1.0.1 py37h6f5d04a_5_cpu conda-forge asteval 0.9.16 pyh5ca1d4c_0 conda-forge astroid 2.3.3 py37_1 conda-forge astropy 4.0.1.post1 py37h8f50634_0 conda-forge astunparse 1.6.3 py_0 defaults async-timeout 3.0.1 py_1000 conda-forge async_generator 1.10 py_0 conda-forge attrs 19.3.0 py_0 conda-forge autopep8 1.5.3 pyh9f0ad1d_0 conda-forge aws-c-common 0.4.57 he1b5a44_0 conda-forge aws-c-event-stream 0.1.6 h72b8ae1_3 conda-forge aws-checksums 0.1.9 h346380f_0 conda-forge aws-sdk-cpp 1.7.164 h69f4914_4 conda-forge backcall 0.2.0 pyh9f0ad1d_0 conda-forge bamtools 2.5.1 he513fc3_6 bioconda bandage 0.8.1 h30c83c5_1 bioconda barrnap 0.9 2 bioconda bat 0.15.4 h516909a_1 conda-forge bbmap 38.86 h1296035_0 bioconda bcbio-gff 0.6.6 pyh864c0ab_1 bioconda bcrypt 3.1.7 py37h8f50634_1 conda-forge beautifulsoup4 4.9.1 py37hc8dfbb8_0 conda-forge bedtools 2.29.2 hc088bd4_0 bioconda binsanity 0.4.4 pyh864c0ab_1 bioconda binutils 2.34 h2122c62_9 conda-forge binutils_impl_linux-64 2.34 h2122c62_9 conda-forge binutils_linux-64 2.34 h47ac705_21 conda-forge bioawk 1.0 hed695b0_5 bioconda bioconductor-aldex2 1.20.0 r40_0 bioconda bioconductor-biobase 2.48.0 r40h037d062_0 bioconda bioconductor-biocgenerics 0.34.0 r40_0 bioconda bioconductor-biocparallel 1.22.0 r40h5f743cb_0 bioconda bioconductor-biomformat 1.16.0 r40_0 bioconda bioconductor-biostrings 2.56.0 r40h037d062_0 bioconda bioconductor-delayedarray 0.14.0 r40h037d062_0 bioconda bioconductor-genomeinfodb 1.24.0 r40_0 bioconda bioconductor-genomeinfodbdata 1.2.3 r40_0 bioconda bioconductor-genomicranges 1.40.0 r40h037d062_0 bioconda bioconductor-iranges 2.22.1 r40h037d062_0 bioconda bioconductor-multtest 2.44.0 r40h037d062_0 bioconda bioconductor-phyloseq 1.32.0 r40_0 bioconda bioconductor-rhdf5 2.32.0 r40h5f743cb_0 bioconda bioconductor-rhdf5lib 1.10.0 r40h037d062_0 bioconda bioconductor-s4vectors 0.26.0 r40h037d062_0 bioconda bioconductor-summarizedexperiment 1.18.1 r40_0 bioconda bioconductor-xvector 0.28.0 r40h037d062_0 bioconda bioconductor-zlibbioc 1.34.0 r40h037d062_0 bioconda biom-format 2.1.8 py37hc1659b7_0 conda-forge biopython 1.77 py37h8f50634_0 conda-forge black 19.10b0 py37_0 conda-forge blas 2.16 mkl conda-forge blast 2.9.0 pl526h3066fca_4 bioconda bleach 3.1.5 pyh9f0ad1d_0 conda-forge blinker 1.4 py37_0 defaults bokeh 2.1.1 py37_0 defaults boltons 20.2.1 pyh9f0ad1d_0 conda-forge boost 1.70.0 py37h9de70de_1 conda-forge boost-cpp 1.70.0 h7b93d67_3 conda-forge boto3 1.14.28 pyh9f0ad1d_0 conda-forge botocore 1.17.28 pyh9f0ad1d_0 conda-forge bowtie2 2.4.1 py37h8270d21_3 bioconda bracken 2.6.0 py37h9a982cc_2 bioconda branca 0.3.1 py_0 conda-forge brotli 1.0.9 he1b5a44_0 conda-forge brotlipy 0.7.0 py37h516909a_1000 conda-forge bucketcache 0.12.1 py37_1 conda-forge bumpversion 0.5.3 py_1001 conda-forge burst 1.0 0 knights-lab bwa 0.7.17 hed695b0_7 bioconda bwidget 1.9.14 0 conda-forge bx-python 0.8.9 py37h029c07a_1 bioconda bzip2 1.0.8 h516909a_2 conda-forge c-ares 1.16.1 h516909a_0 conda-forge c-compiler 1.1.1 h516909a_0 conda-forge ca-certificates 2020.7.22 0 defaults cachecontrol 0.12.6 py_0 conda-forge cachetools 4.1.1 py_0 conda-forge cairo 1.16.0 h3fc0475_1005 conda-forge capnproto 0.6.1 hfc679d8_1 conda-forge cd-hit 4.8.1 h8b12597_3 bioconda certifi 2020.6.20 py37hc8dfbb8_0 conda-forge cffi 1.14.0 py37hd463f26_0 conda-forge chardet 3.0.4 py37hc8dfbb8_1006 conda-forge checkm-genome 1.1.2 py_1 bioconda clang 9.0.1 default_hde54327_0 conda-forge clang-tools 9.0.1 default_hde54327_0 conda-forge clang_variant 1.0 cling_v0.7 conda-forge clangdev 5.0.0 h5d5d61b_1008 conda-forge clangxx 9.0.1 default_hde54327_0 conda-forge click 7.1.2 pyh9f0ad1d_0 conda-forge cling 0.7 he513fc3_1 conda-forge cloudpickle 1.5.0 py_0 conda-forge clustalw 2.1 hc9558a2_5 bioconda clyent 1.2.2 py37_1 defaults cmake 3.17.0 h28c56e5_0 conda-forge cmarkgfm 0.4.2 py37h516909a_2 conda-forge cmseq 1.0 pyh5ca1d4c_0 bioconda colorama 0.4.3 py_0 conda-forge colorcet 2.0.2 py_0 defaults coloredlogs 14.0 py37hc8dfbb8_1 conda-forge colormath 3.0.0 py_2 conda-forge compilers 1.1.1 0 conda-forge concoct 1.1.0 py37h5f20ad3_2 bioconda conda 4.8.4 py37hc8dfbb8_2 conda-forge conda-build 3.19.2 py37hc8dfbb8_2 conda-forge conda-package-handling 1.6.1 py37h7b6447c_0 defaults configargparse 1.2.3 pyh9f0ad1d_0 conda-forge configparser 5.0.0 py_0 conda-forge confuse 1.3.0 pyh9f0ad1d_0 conda-forge coreutils 8.31 h516909a_0 conda-forge coverage 5.2.1 py37h8f50634_0 conda-forge coverm 0.5.0 hc216eb9_0 bioconda cppzmq 4.6.0 hc9558a2_0 conda-forge crc32c 2.0 py37h516909a_0 conda-forge cryptography 3.0 py37hb09aad4_0 conda-forge curl 7.71.1 he644dc0_4 conda-forge cxx-compiler 1.1.1 hc9558a2_0 conda-forge cycler 0.10.0 py_2 conda-forge cython 0.29.21 py37h3340039_0 conda-forge cytoolz 0.10.1 py37h516909a_0 conda-forge das_tool 1.1.2 r40_1 bioconda dashing 0.4.0 hedd95b5_1 bioconda dask 2.21.0 py_0 conda-forge dask-core 2.21.0 py_0 conda-forge datrie 0.8.2 py37h8f50634_0 conda-forge dbus 1.13.16 hb2f20db_0 defaults decorator 4.4.2 py_0 conda-forge defusedxml 0.6.0 py_0 conda-forge dendropy 4.4.0 pyh864c0ab_2 bioconda deprecated 1.2.10 pyh9f0ad1d_0 conda-forge descartes 1.1.0 py37_0 defaults diamond 2.0.4 h56fc30b_0 bioconda distlib 0.3.1 pyh9f0ad1d_0 conda-forge distributed 2.21.0 py37hc8dfbb8_0 conda-forge docutils 0.15.2 py37_0 conda-forge dropbox 10.2.0 py37_0 defaults elyra 1.1.0 py_0 conda-forge emacs 26.3 h3439afb_4 conda-forge entrez-direct 13.3 pl526h375a9b1_0 bioconda entrypoints 0.3 py37hc8dfbb8_1001 conda-forge enum34 1.1.10 py37hc8dfbb8_1 conda-forge epa-ng 0.3.6 he513fc3_0 bioconda et_xmlfile 1.0.1 py_1001 conda-forge expat 2.2.9 he1b5a44_2 conda-forge fastani 1.31 he1c1bb9_0 bioconda fastcluster 1.1.26 py37h0da4684_1 conda-forge fastp 0.20.1 h8b12597_0 bioconda fastq-pair 1.0 hf484d3e_0 bioconda fastqc 0.11.9 0 bioconda fasttree 2.1.10 h516909a_4 bioconda fd-find 8.1.1 h516909a_0 conda-forge fftw 3.3.8 mpi_mpich_h3f9e1be_1011 conda-forge filechunkio 1.8 py_2 conda-forge filelock 3.0.12 pyh9f0ad1d_0 conda-forge fish 3.1.2 ha2fa232_0 conda-forge flake8 3.8.3 py_1 conda-forge flye 2.7.1 py37h8270d21_2 bioconda font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge font-ttf-inconsolata 2.001 hcb22688_0 defaults font-ttf-source-code-pro 2.030 0 defaults font-ttf-ubuntu 0.83 0 defaults fontconfig 2.13.1 h1056068_1002 conda-forge fonts-conda-ecosystem 1 0 conda-forge fonts-conda-forge 1 0 conda-forge fortran-compiler 1.1.1 he991be0_0 conda-forge fraggenescan 1.31 h516909a_2 bioconda freetype 2.10.2 he06d7ca_0 conda-forge fribidi 1.0.10 h516909a_0 conda-forge fsspec 0.7.4 py_0 conda-forge ftputil 4.0.0 py_0 conda-forge future 0.18.2 py37hc8dfbb8_1 conda-forge fzf 0.21.1 h375a9b1_1 conda-forge galah 0.2.0 h516909a_0 bioconda gappa 0.6.0 he513fc3_0 bioconda gast 0.3.3 py_0 conda-forge gawk 5.1.0 h516909a_0 conda-forge gcc_impl_linux-64 7.5.0 hda68d29_10 conda-forge gcc_linux-64 7.5.0 ha781d05_21 conda-forge gdbm 1.18 h0a1914f_1 conda-forge gdk-pixbuf 2.36.12 h3f25603_1005 conda-forge genomepy 0.9.0 py_0 bioconda gettext 0.19.8.1 hc5be6a0_1002 conda-forge gflags 2.2.2 he1b5a44_1004 conda-forge gfortran_impl_linux-64 7.5.0 h64c220c_10 conda-forge gfortran_linux-64 7.5.0 ha781d05_21 conda-forge ghostscript 9.22 hf484d3e_1001 conda-forge giflib 5.2.1 h516909a_2 conda-forge git 2.26.0 pl526hf241897_0 conda-forge gitdb 4.0.5 py_0 conda-forge gitpython 3.1.3 py_0 conda-forge glib 2.65.0 h6f030ca_0 conda-forge glimmerhmm 3.0.4 pl526hf484d3e_3 bioconda glob2 0.7 py_0 conda-forge glog 0.4.0 h49b9bf7_3 conda-forge glpk 4.65 he80fd80_1002 conda-forge gmp 6.2.0 he1b5a44_2 conda-forge gnutls 3.6.13 h79a8f9a_0 conda-forge gobject-introspection 1.64.1 py37h619baee_1 conda-forge google-api-core 1.20.1 py37hc8dfbb8_1 conda-forge google-api-python-client 1.10.0 pyh9f0ad1d_0 conda-forge google-auth 1.19.2 py_0 conda-forge google-auth-httplib2 0.0.3 py_3 conda-forge google-auth-oauthlib 0.4.1 py_2 conda-forge google-cloud-core 1.3.0 py_0 conda-forge google-cloud-storage 1.28.1 pyh9f0ad1d_0 conda-forge google-pasta 0.2.0 pyh8c360ce_0 conda-forge google-resumable-media 0.5.1 pyh9f0ad1d_0 conda-forge googleapis-common-protos 1.51.0 py37hc8dfbb8_2 conda-forge graphite2 1.3.14 h23475e2_0 defaults graphviz 2.42.3 h0511662_0 conda-forge grpc-cpp 1.30.2 heedbac9_0 conda-forge grpcio 1.30.0 py37hb0870dc_0 conda-forge gsl 2.6 h294904e_0 conda-forge gst-plugins-base 1.14.5 h0935bb2_2 conda-forge gstreamer 1.14.5 h36ae1b5_2 conda-forge gtdbtk 1.3.0 py_1 bioconda gxx_impl_linux-64 7.5.0 h64c220c_10 conda-forge gxx_linux-64 7.5.0 ha781d05_21 conda-forge h5py 2.10.0 nompi_py37h513d04c_102 conda-forge harfbuzz 2.7.1 hee91db6_0 conda-forge hdf5 1.10.5 nompi_h3c11f04_1104 conda-forge hdmedians 0.13 py37h035aef0_1002 defaults heapdict 1.0.1 py_0 conda-forge hmmer 3.1b2 3 bioconda hmmer2 2.3.2 h516909a_4 bioconda htmlmin 0.1.12 py_1 conda-forge htop 2.2.0 hf8c457e_1000 conda-forge htslib 1.10.2 h78d89cc_0 bioconda httpie 2.1.0 py37hc8dfbb8_0 conda-forge httplib2 0.18.1 pyh9f0ad1d_0 conda-forge humanfriendly 8.2 py37hc8dfbb8_0 conda-forge humann 3.0.0.alpha.3 py37h83b1523_0 biobakery icu 67.1 he1b5a44_0 conda-forge idba 1.1.3 1 bioconda idna 2.10 pyh9f0ad1d_0 conda-forge igraph 0.7.1 4 conda-forge imagehash 4.1.0 pyh9f0ad1d_0 conda-forge imagemagick 7.0.10_25 pl526h201ca68_0 conda-forge importlib-metadata 1.7.0 py37hc8dfbb8_0 conda-forge importlib_metadata 1.7.0 0 conda-forge infernal 1.1.2 h516909a_3 bioconda insilicoseq 1.4.6 py_0 bioconda intel-openmp 2020.1 217 defaults intervaltree 3.0.2 py_1 defaults ipycytoscape 1.0.3 py_0 conda-forge ipydatawidgets 4.0.1 pyh9f0ad1d_1 conda-forge ipykernel 5.3.4 py37h43977f1_0 conda-forge ipyleaflet 0.13.3 pyh9f0ad1d_0 conda-forge ipympl 0.5.7 pyh9f0ad1d_1 conda-forge ipython 7.16.1 py37h43977f1_0 conda-forge ipython_genutils 0.2.0 py37_0 defaults ipywidgets 7.5.1 py_0 conda-forge iqtree 2.0.3 h176a8bc_0 bioconda irep 1.1.7 pyh24bf2e0_1 bioconda isort 4.3.21 py37hc8dfbb8_1 conda-forge itk 5.1.1 py37hc8dfbb8_2 conda-forge itk-core 5.1.1 pypi_0 pypi itk-filtering 5.1.1 pypi_0 pypi itk-numerics 5.1.1 pypi_0 pypi itk-registration 5.1.1 pypi_0 pypi itk-segmentation 5.1.1 pypi_0 pypi itkwidgets 0.32.0 py37hc8dfbb8_0 conda-forge jbig 2.1 h516909a_2002 conda-forge jdcal 1.4.1 py_0 conda-forge jedi 0.17.2 py37hc8dfbb8_0 conda-forge jeepney 0.4.3 py_0 conda-forge jinja2 2.11.2 pyh9f0ad1d_0 conda-forge jmespath 0.10.0 pyh9f0ad1d_0 conda-forge joblib 0.16.0 py_0 conda-forge jpeg 9d h516909a_0 conda-forge json5 0.9.5 py_0 defaults jsonschema 3.2.0 py37hc8dfbb8_1 conda-forge jupyter-lsp 0.9.1 pypi_0 pypi jupyter-tensorboard 0.2.0 pypi_0 pypi jupyter_client 6.1.7 py_0 conda-forge jupyter_core 4.6.3 py37hc8dfbb8_1 conda-forge jupyter_server 0.1.1 py37_0 conda-forge jupyterlab 2.2.6 py_0 conda-forge jupyterlab-git 0.21.0 py_0 conda-forge jupyterlab_code_formatter 1.3.6 py_0 conda-forge jupyterlab_pygments 0.1.1 pyh9f0ad1d_0 conda-forge jupyterlab_server 1.2.0 py_0 conda-forge k8 0.2.5 he513fc3_0 bioconda keras 2.4.3 0 defaults keras-base 2.4.3 py_0 defaults keras-preprocessing 1.1.0 py_1 defaults kernel-headers_linux-64 3.10.0 h77966d4_9 conda-forge keyring 21.2.1 py37_0 defaults kfp 1.0.0 py_0 conda-forge kfp-notebook 0.11.0 py_0 conda-forge kfp-server-api 0.5.0 pyh9f0ad1d_0 conda-forge kiwisolver 1.2.0 py37h99015e2_0 conda-forge kraken2 2.0.9beta pl526hc9558a2_0 bioconda krb5 1.17.1 hfafb76e_2 conda-forge latexify 0.0.0 dev_0 lazy-object-proxy 1.5.1 py37h8f50634_0 conda-forge lcms2 2.11 hbd6801e_0 conda-forge ld_impl_linux-64 2.34 hc38a660_9 conda-forge ldc 1.20.0 h9a1ace1_1 conda-forge leaflet 0.0.3 pypi_0 pypi libarchive 3.3.3 h3a8160c_1008 conda-forge libblas 3.8.0 16_mkl conda-forge libcblas 3.8.0 16_mkl conda-forge libclang 9.0.1 default_hde54327_0 conda-forge libclang-cpp 10.0.1 default_hde54327_0 conda-forge libclang-cpp10 10.0.1 default_hde54327_0 conda-forge libcroco 0.6.13 h8d621e5_1 conda-forge libcurl 7.71.1 hcdd3856_4 conda-forge libdb 6.1.26 he1b5a44_2002 conda-forge libdeflate 1.3 h516909a_0 conda-forge libedit 3.1.20191231 h46ee950_1 conda-forge libev 4.33 h516909a_0 conda-forge libevent 2.1.10 hcdb4288_1 conda-forge libfaketime 0.9.8 h516909a_0 conda-forge libffi 3.2.1 he1b5a44_1007 conda-forge libgcc 7.2.0 h69d50b8_2 conda-forge libgcc-ng 9.2.0 h24d8f2e_2 conda-forge libgd 2.2.5 h341251c_1008 conda-forge libgfortran-ng 7.5.0 hdf63c60_10 conda-forge libgomp 9.2.0 h24d8f2e_2 conda-forge libiconv 1.15 h516909a_1006 conda-forge libidn11 1.34 h1cef754_0 conda-forge libidn2 2.3.0 h516909a_0 conda-forge liblapack 3.8.0 16_mkl conda-forge liblapacke 3.8.0 16_mkl conda-forge liblief 0.10.1 he1b5a44_0 conda-forge libllvm10 10.0.1 he513fc3_0 conda-forge libllvm9 9.0.1 he513fc3_1 conda-forge libnghttp2 1.41.0 hab1572f_1 conda-forge libopenblas 0.3.10 pthreads_hb3c22a3_4 conda-forge libpng 1.6.37 hed695b0_1 conda-forge libprotobuf 3.12.4 h8b12597_0 conda-forge librsvg 2.49.3 h33a7fed_0 conda-forge libsodium 1.0.18 h516909a_0 conda-forge libsolv 0.7.14 h8b12597_3 conda-forge libssh2 1.9.0 hab1572f_4 conda-forge libstdcxx-ng 9.2.0 hdf63c60_2 conda-forge libthrift 0.13.0 hbe8ec66_6 conda-forge libtiff 4.1.0 hc7e4089_6 conda-forge libtool 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conda-forge ruamel_yaml 0.15.87 py37h7b6447c_1 defaults ruby 2.6.6 hebe951e_0 conda-forge rust-bio-tools 0.10.3 heda7bfa_0 bioconda s3transfer 0.3.3 py37hc8dfbb8_1 conda-forge sambamba 0.7.1 h984e79f_3 bioconda samtools 1.10 h9402c20_2 bioconda scikit-bio 0.5.6 py37h03ebfcd_2 conda-forge scikit-learn 0.23.1 py37h8a51577_0 conda-forge scipy 1.5.2 py37hb14ef9d_0 conda-forge seaborn 0.10.1 1 conda-forge seaborn-base 0.10.1 py_1 conda-forge secretstorage 3.1.2 py37_1 defaults sed 4.8 hbfbb72e_0 conda-forge send2trash 1.5.0 py37_0 defaults seqkit 0.13.2 0 bioconda seqtk 1.3 hed695b0_2 bioconda setuptools 49.2.0 py37_0 defaults sickle-trim 1.33 hed695b0_5 bioconda simplejson 3.17.2 py37h8f50634_0 conda-forge simplesam 0.1.3.1 pyh864c0ab_1 bioconda six 1.15.0 pyh9f0ad1d_0 conda-forge slacker 0.14.0 py_0 conda-forge smmap 3.0.4 pyh9f0ad1d_0 conda-forge snakemake 5.14.0 0 bioconda snakemake-minimal 5.14.0 py_1 bioconda snakeparse 0.1.0 py_2 bioconda snappy 1.1.8 he1b5a44_3 conda-forge snowballstemmer 2.0.0 py_0 conda-forge sortedcontainers 2.2.2 pyh9f0ad1d_0 conda-forge soupsieve 2.0.1 py37hc8dfbb8_0 conda-forge spades 3.14.1 h2d02072_0 bioconda spectate 0.4.1 pyh9f0ad1d_0 conda-forge spectra 0.0.11 py_1 conda-forge sqlalchemy 1.3.10 py37h516909a_0 conda-forge sqlite 3.32.3 hcee41ef_1 conda-forge sra-tools 2.9.6 hf484d3e_0 bioconda starcode 1.3 h516909a_2 bioconda statsmodels 0.11.1 py37h8f50634_2 conda-forge strip-hints 0.1.8 py_0 conda-forge subread 2.0.1 hed695b0_0 bioconda sysroot_linux-64 2.17 h77966d4_9 conda-forge t_coffee 11.0.8 py37hea885bf_8 bioconda tabix 0.2.6 ha92aebf_0 bioconda tabulate 0.8.7 pyh9f0ad1d_0 conda-forge tangled-up-in-unicode 0.0.6 pyh9f0ad1d_0 conda-forge tar 1.32 hd4ba37b_0 conda-forge tbb 2020.1 hc9558a2_0 conda-forge tbl2asn 25.7 0 bioconda tbl2asn-forever 25.7.1f 0 bioconda tblib 1.6.0 py_0 conda-forge tenacity 6.2.0 py37hc8dfbb8_0 conda-forge tensorboard 2.3.0 py_0 conda-forge tensorboard-plugin-wit 1.6.0 pyh9f0ad1d_0 conda-forge tensorflow 2.2.0 mkl_py37h6e9ce2d_0 defaults tensorflow-base 2.2.0 mkl_py37hd506778_0 defaults tensorflow-estimator 2.2.0 pyh208ff02_0 defaults termcolor 1.1.0 py37_1 defaults terminado 0.8.3 py37hc8dfbb8_1 conda-forge testpath 0.4.4 py_0 conda-forge texttable 1.6.2 py_0 conda-forge textwrap3 0.9.2 py_0 conda-forge threadpoolctl 2.1.0 pyh5ca1d4c_0 conda-forge thrift-compiler 0.13.0 hbe8ec66_6 conda-forge thrift-cpp 0.13.0 6 conda-forge tidyp 1.04 1 bioconda tk 8.6.10 hed695b0_0 conda-forge tktable 2.10 h555a92e_3 conda-forge tmux 3.1 ha1ba12b_0 conda-forge toml 0.10.1 pyh9f0ad1d_0 conda-forge toolz 0.10.0 py_0 conda-forge toposort 1.5 py_3 conda-forge tornado 6.0.4 py37h8f50634_1 conda-forge tox 3.19.0 py37hc8dfbb8_0 conda-forge tqdm 4.48.0 pyh9f0ad1d_0 conda-forge traitlets 4.3.3 py37hc8dfbb8_1 conda-forge traittypes 0.2.1 py_1 conda-forge trimal 1.4.1 hc9558a2_4 bioconda twine 3.2.0 py37hc8dfbb8_0 conda-forge typed-ast 1.4.1 py37h516909a_0 conda-forge typing_extensions 3.7.4.2 py_0 conda-forge ucsc-bedtogenepred 377 h446ed27_1 bioconda ucsc-genepredtobed 377 h446ed27_3 bioconda ucsc-genepredtogtf 377 h446ed27_3 bioconda ucsc-gff3togenepred 377 h446ed27_1 bioconda ucsc-gtftogenepred 377 h446ed27_3 bioconda ujson 1.35 py37h3340039_1002 conda-forge uncertainties 3.1.4 py_0 conda-forge unzip 6.0 h516909a_1 conda-forge uritemplate 3.0.1 py_0 conda-forge urllib3 1.24.2 py37_0 conda-forge vcftools 0.1.16 he513fc3_4 bioconda vim 8.2.1149 py37he9c8336_0 conda-forge virtualenv 20.0.20 py37hc8dfbb8_1 conda-forge visions 0.4.4 pyh9f0ad1d_0 conda-forge voila 0.1.21 py_0 conda-forge vsearch 2.15.0 h2d02072_0 bioconda wand 0.5.9 py_0 conda-forge watchdog 0.10.3 py37hc8dfbb8_1 conda-forge wcwidth 0.2.5 pyh9f0ad1d_0 conda-forge webencodings 0.5.1 py37_1 defaults websocket-client 0.57.0 py37hc8dfbb8_2 conda-forge werkzeug 1.0.1 pyh9f0ad1d_0 conda-forge wget 1.20.1 h22169c7_0 conda-forge wheel 0.34.2 py_1 conda-forge widgetsnbextension 3.5.1 py37hc8dfbb8_1 conda-forge wrapt 1.12.1 py37h8f50634_1 conda-forge xeus 0.24.1 h4d8c418_0 conda-forge xeus-cling 0.10.0 he513fc3_0 conda-forge xlrd 1.2.0 pyh9f0ad1d_1 conda-forge xmlrunner 1.7.7 py_0 conda-forge xmltodict 0.12.0 py_0 conda-forge xorg-fixesproto 5.0 h14c3975_1002 conda-forge xorg-inputproto 2.3.2 h14c3975_1002 conda-forge xorg-kbproto 1.0.7 h14c3975_1002 conda-forge xorg-libice 1.0.10 h516909a_0 conda-forge xorg-libsm 1.2.3 h84519dc_1000 conda-forge xorg-libx11 1.6.9 h516909a_0 conda-forge xorg-libxaw 1.0.13 h14c3975_1002 conda-forge xorg-libxext 1.3.4 h516909a_0 conda-forge xorg-libxfixes 5.0.3 h516909a_1004 conda-forge xorg-libxft 2.3.3 h71203ad_0 conda-forge xorg-libxi 1.7.10 h516909a_0 conda-forge xorg-libxmu 1.1.3 h516909a_0 conda-forge xorg-libxpm 3.5.13 h516909a_0 conda-forge xorg-libxrender 0.9.10 h516909a_1002 conda-forge xorg-libxt 1.1.5 h516909a_1003 conda-forge xorg-libxtst 1.2.3 h516909a_1002 conda-forge xorg-recordproto 1.14.2 h516909a_1002 conda-forge xorg-renderproto 0.11.1 h14c3975_1002 conda-forge xorg-xextproto 7.3.0 h14c3975_1002 conda-forge xorg-xproto 7.0.31 h14c3975_1007 conda-forge xsv 0.13.0 0 conda-forge xtl 0.6.17 hc9558a2_0 conda-forge xz 5.2.5 h516909a_1 conda-forge yaml 0.2.5 h516909a_0 conda-forge yapf 0.30.0 py_0 defaults yarl 1.4.2 py37h7b6447c_0 defaults yarn 1.22.5 0 conda-forge zeromq 4.3.2 he1b5a44_3 conda-forge zict 2.0.0 py_0 conda-forge zipp 3.1.0 py_0 conda-forge zlib 1.2.11 h516909a_1006 conda-forge zstandard 0.14.0 py37h3340039_1 conda-forge zstd 1.4.5 h6597ccf_2 conda-forge ```


Details about conda and system ( conda info ):

``` $ conda info active environment : None shell level : 0 user config file : /home/zhujie/.condarc populated config files : /home/zhujie/.condarc conda version : 4.8.4 conda-build version : 3.19.2 python version : 3.7.8.final.0 virtual packages : __glibc=2.17 base environment : /ldfssz1/ST_META/share/User/zhujie/.conda/envs/bioenv3.7 (writable) channel URLs : https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64 https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda/linux-64 https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda/noarch https://mirrors.bfsu.edu.cn/anaconda/cloud/biobakery/linux-64 https://mirrors.bfsu.edu.cn/anaconda/cloud/biobakery/noarch https://mirrors.bfsu.edu.cn/anaconda/cloud/qiime2/linux-64 https://mirrors.bfsu.edu.cn/anaconda/cloud/qiime2/noarch https://mirrors.bfsu.edu.cn/anaconda/cloud/ohmeta/linux-64 https://mirrors.bfsu.edu.cn/anaconda/cloud/ohmeta/noarch https://mirrors.bfsu.edu.cn/anaconda/pkgs/main/linux-64 https://mirrors.bfsu.edu.cn/anaconda/pkgs/main/noarch https://mirrors.bfsu.edu.cn/anaconda/pkgs/free/linux-64 https://mirrors.bfsu.edu.cn/anaconda/pkgs/free/noarch https://mirrors.bfsu.edu.cn/anaconda/pkgs/r/linux-64 https://mirrors.bfsu.edu.cn/anaconda/pkgs/r/noarch package cache : /ldfssz1/ST_META/share/User/zhujie/.conda/pkgs envs directories : /ldfssz1/ST_META/share/User/zhujie/.conda/envs /ldfssz1/ST_META/share/User/zhujie/.conda/envs/bioenv3.7/envs /home/zhujie/.conda/envs platform : linux-64 user-agent : conda/4.8.4 requests/2.24.0 CPython/3.7.8 Linux/3.10.0-862.el7.x86_64 centos/7.5.1804 glibc/2.17 UID:GID : 666715:2782 netrc file : None offline mode : False ```
vtraag commented 4 years ago

PR #31 addresses this, but for some reason the build failed. I didn't have the time to look into this back then, the log files are now gone unfortunately. I will ask for a rebuild and try to solve the issue.

vtraag commented 4 years ago

Not sure why the previous build failed. It is now merged and should become available soon.