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conda-forge / r-png-feedstock

A conda-smithy repository for r-png.
BSD 3-Clause "New" or "Revised" License
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Potential incompatibility with libpng on OS X #10

Closed ebolyen closed 1 year ago

ebolyen commented 1 year ago

Solution to issue cannot be found in the documentation.

Issue

Hello, we're running into an issue between bioconda and conda-forge with the latest rebuild of some R libraries on OS X. In particular, I'm seeing r-png with build 0.1_7-r41h815d134_1005 is incompatible with bioconductor-dada2 (which is still R 4.1).

We see this error: 

Library not loaded: @rpath/libpng16.16.dylib
Referenced from: /Users/heathermaughan/miniconda3/envs/qiime2-2022.8/lib/R/library/png/libs/png.dylib
Reason: Incompatible library version: png.dylib requires version 55.0.0 or later, but libpng16.16.dylib provides version 54.0.0

This wasn't an issue with build 0.1_7-r41h28b5c78_1004. It kind of looks like r-png was compiled against a different libpng, conda was solving libpng to 1.6.37-h5481273_4 in both of these cases. Or perhaps OS X is masking something?

Installed packages


    _r-mutex:                          1.0.1-anacondar_1                           conda-forge                                          
    appnope:                           0.1.3-pyhd8ed1ab_0                          conda-forge                                          
    asttokens:                         2.0.8-pyhd8ed1ab_0                          conda-forge                                          
    atpublic:                          3.0.1-pyhd8ed1ab_0                          conda-forge                                          
    attrs:                             22.1.0-pyh71513ae_1                         conda-forge                                          
    backcall:                          0.2.0-pyh9f0ad1d_0                          conda-forge                                          
    backports:                         1.0-py_2                                    conda-forge                                          
    backports.functools_lru_cache:     1.6.4-pyhd8ed1ab_0                          conda-forge                                          
    bibtexparser:                      1.3.0-pyhd8ed1ab_0                          conda-forge                                          
    bioconductor-biobase:              2.54.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-biocgenerics:         0.40.0-r41hdfd78af_0                        bioconda                                             
    bioconductor-biocparallel:         1.28.3-r41hb890f52_1                        bioconda                                             
    bioconductor-biostrings:           2.62.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-dada2:                1.22.0-r41hb890f52_2                        bioconda                                             
    bioconductor-delayedarray:         0.20.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-genomeinfodb:         1.30.0-r41hdfd78af_0                        bioconda                                             
    bioconductor-genomeinfodbdata:     1.2.7-r41hdfd78af_2                         bioconda                                             
    bioconductor-genomicalignments:    1.30.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-genomicranges:        1.46.1-r41h3be46a4_1                        bioconda                                             
    bioconductor-iranges:              2.28.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-matrixgenerics:       1.6.0-r41hdfd78af_0                         bioconda                                             
    bioconductor-rhtslib:              1.26.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-rsamtools:            2.10.0-r41hb890f52_2                        bioconda                                             
    bioconductor-s4vectors:            0.32.3-r41haba8685_0                        bioconda                                             
    bioconductor-shortread:            1.52.0-r41hb890f52_2                        bioconda                                             
    bioconductor-summarizedexperiment: 1.24.0-r41hdfd78af_0                        bioconda                                             
    bioconductor-xvector:              0.34.0-r41h3be46a4_2                        bioconda                                             
    bioconductor-zlibbioc:             1.40.0-r41h3be46a4_2                        bioconda                                             
    biom-format:                       2.1.12-py38h4277f33_1                       conda-forge                                          
    blast:                             2.12.0-h0370960_3                           bioconda                                             
    bokeh:                             2.4.3-pyhd8ed1ab_3                          conda-forge                                          
    bowtie2:                           2.4.5-py38h85b03c0_3                        bioconda                                             
    brotli:                            1.0.9-h5eb16cf_7                            conda-forge                                          
    brotli-bin:                        1.0.9-h5eb16cf_7                            conda-forge                                          
    brotlipy:                          0.7.0-py38hed1de0f_1004                     conda-forge                                          
    bwidget:                           1.9.14-h694c41f_1                           conda-forge                                          
    bzip2:                             1.0.8-h0d85af4_4                            conda-forge                                          
    c-ares:                            1.18.1-h0d85af4_0                           conda-forge                                          
    ca-certificates:                   2022.6.15.2-h033912b_0                      conda-forge                                          
    cachecontrol:                      0.12.11-pyhd8ed1ab_0                        conda-forge                                          
    cairo:                             1.16.0-h904041c_1013                        conda-forge                                          
    cctools_osx-64:                    973.0.1-h3eff9a4_10                         conda-forge                                          
    certifi:                           2022.6.15.2-pyhd8ed1ab_0                    conda-forge                                          
    cffi:                              1.15.1-py38h86886aa_0                       conda-forge                                          
    charset-normalizer:                2.1.1-pyhd8ed1ab_0                          conda-forge                                          
    clang:                             14.0.4-h694c41f_0                           conda-forge                                          
    clang-14:                          14.0.4-default_h55ffa42_0                   conda-forge                                          
    clang_osx-64:                      14.0.4-h3a95cd4_2                           conda-forge                                          
    clangxx:                           14.0.4-default_h55ffa42_0                   conda-forge                                          
    clangxx_osx-64:                    14.0.4-he1dbc44_2                           conda-forge                                          
    click:                             8.1.3-py38h50d1736_0                        conda-forge                                          
    colorama:                          0.4.5-pyhd8ed1ab_0                          conda-forge                                          
    compiler-rt:                       14.0.4-h7fcd477_0                           conda-forge                                          
    compiler-rt_osx-64:                14.0.4-h6df654d_0                           conda-forge                                          
    cryptography:                      37.0.4-py38h0f8513e_0                       conda-forge                                          
    curl:                              7.83.1-h372c54d_0                           conda-forge                                          
    cutadapt:                          4.1-py38h431a6f7_1                          bioconda                                             
    cycler:                            0.11.0-pyhd8ed1ab_0                         conda-forge                                          
    cython:                            0.29.32-py38h1c67a95_0                      conda-forge                                          
    deblur:                            1.1.1-pyhdfd78af_0                          bioconda                                             
    debugpy:                           1.6.3-py38hd331d03_0                        conda-forge                                          
    decorator:                         4.4.2-py_0                                  conda-forge                                          
    dendropy:                          4.5.2-pyh3252c3a_0                          bioconda                                             
    dill:                              0.3.5.1-pyhd8ed1ab_0                        conda-forge                                          
    dnaio:                             0.9.1-py38h431a6f7_1                        bioconda                                             
    emperor:                           1.0.3-py38h50d1736_0                        conda-forge                                          
    entrez-direct:                     16.2-h193322a_1                             bioconda                                             
    entrypoints:                       0.4-pyhd8ed1ab_0                            conda-forge                                          
    executing:                         1.0.0-pyhd8ed1ab_0                          conda-forge                                          
    expat:                             2.4.8-h96cf925_0                            conda-forge                                          
    fastcluster:                       1.2.6-py38hb872667_1                        conda-forge                                          
    fasttree:                          2.1.11-hdcdfbac_1                           bioconda                                             
    flufl.lock:                        7.1-pyhd8ed1ab_0                            conda-forge                                          
    font-ttf-dejavu-sans-mono:         2.37-hab24e00_0                             conda-forge                                          
    font-ttf-inconsolata:              3.000-h77eed37_0                            conda-forge                                          
    font-ttf-source-code-pro:          2.038-h77eed37_0                            conda-forge                                          
    font-ttf-ubuntu:                   0.83-hab24e00_0                             conda-forge                                          
    fontconfig:                        2.14.0-h5bb23bf_1                           conda-forge                                          
    fonts-conda-ecosystem:             1-0                                         conda-forge                                          
    fonts-conda-forge:                 1-0                                         conda-forge                                          
    fonttools:                         4.37.1-py38hef030d1_0                       conda-forge                                          
    freetype:                          2.12.1-h3f81eb7_0                           conda-forge                                          
    fribidi:                           1.0.10-hbcb3906_0                           conda-forge                                          
    future:                            0.18.2-py38h50d1736_5                       conda-forge                                          
    gettext:                           0.19.8.1-hd1a6beb_1008                      conda-forge                                          
    gfortran_impl_osx-64:              9.5.0-h2221f41_25                           conda-forge                                          
    gfortran_osx-64:                   9.5.0-h18f7dce_0                            conda-forge                                          
    gmp:                               6.2.1-h2e338ed_0                            conda-forge                                          
    gneiss:                            0.4.6-py_0                                  bioconda                                             
    graphite2:                         1.3.13-h2e338ed_1001                        conda-forge                                          
    gsl:                               2.7-h93259b0_0                              conda-forge                                          
    h5py:                              2.10.0-nompi_py38h9a16e60_106               conda-forge                                          
    harfbuzz:                          5.1.0-h00bb2c2_0                            conda-forge                                          
    hdf5:                              1.10.6-nompi_hc5d9132_1114                  conda-forge                                          
    hdmedians:                         0.14.2-py38h4277f33_2                       conda-forge                                          
    hmmer:                             3.1b2-3                                     bioconda                                             
    htslib:                            1.15.1-hc057d7f_0                           bioconda                                             
    icu:                               70.1-h96cf925_0                             conda-forge                                          
    idna:                              3.3-pyhd8ed1ab_0                            conda-forge                                          
    ijson:                             3.1.3-pyhd3deb0d_0                          conda-forge                                          
    importlib-metadata:                4.11.4-py38h50d1736_0                       conda-forge                                          
    importlib_resources:               5.9.0-pyhd8ed1ab_0                          conda-forge                                          
    iniconfig:                         1.1.1-pyh9f0ad1d_0                          conda-forge                                          
    iow:                               1.0.5-py38hb139fc8_1                        bioconda                                             
    ipykernel:                         6.15.2-pyh736e0ef_0                         conda-forge                                          
    ipython:                           8.5.0-pyhd1c38e8_1                          conda-forge                                          
    ipywidgets:                        8.0.2-pyhd8ed1ab_1                          conda-forge                                          
    iqtree:                            2.2.0.3-h135ad0d_1                          bioconda                                             
    isa-l:                             2.30.0-h0d85af4_4                           conda-forge                                          
    isl:                               0.22.1-hb1e8313_2                           conda-forge                                          
    jedi:                              0.18.1-pyhd8ed1ab_2                         conda-forge                                          
    jinja2:                            3.1.2-pyhd8ed1ab_1                          conda-forge                                          
    joblib:                            1.1.0-pyhd8ed1ab_0                          conda-forge                                          
    jpeg:                              9e-hac89ed1_2                               conda-forge                                          
    jsonschema:                        4.15.0-pyhd8ed1ab_0                         conda-forge                                          
    jupyter_client:                    7.3.5-pyhd8ed1ab_0                          conda-forge                                          
    jupyter_core:                      4.11.1-py38h50d1736_0                       conda-forge                                          
    jupyterlab_widgets:                3.0.3-pyhd8ed1ab_0                          conda-forge                                          
    kiwisolver:                        1.4.4-py38hf58141a_0                        conda-forge                                          
    krb5:                              1.19.3-hb49756b_0                           conda-forge                                          
    lcms2:                             2.12-h577c468_0                             conda-forge                                          
    ld64_osx-64:                       609-h1e06c2b_10                             conda-forge                                          
    lerc:                              3.0-he49afe7_0                              conda-forge                                          
    libblas:                           3.9.0-16_osx64_openblas                     conda-forge                                          
    libbrotlicommon:                   1.0.9-h5eb16cf_7                            conda-forge                                          
    libbrotlidec:                      1.0.9-h5eb16cf_7                            conda-forge                                          
    libbrotlienc:                      1.0.9-h5eb16cf_7                            conda-forge                                          
    libcblas:                          3.9.0-16_osx64_openblas                     conda-forge                                          
    libclang-cpp14:                    14.0.4-default_h55ffa42_0                   conda-forge                                          
    libcurl:                           7.83.1-h372c54d_0                           conda-forge                                          
    libcxx:                            14.0.6-hccf4f1f_0                           conda-forge                                          
    libdeflate:                        1.10-h0d85af4_0                             conda-forge                                          
    libedit:                           3.1.20191231-h0678c8f_2                     conda-forge                                          
    libev:                             4.33-haf1e3a3_1                             conda-forge                                          
    libffi:                            3.4.2-h0d85af4_5                            conda-forge                                          
    libgfortran:                       5.0.0-10_4_0_h97931a8_25                    conda-forge                                          
    libgfortran-devel_osx-64:          9.5.0-hc2d6858_25                           conda-forge                                          
    libgfortran5:                      11.3.0-h082f757_25                          conda-forge                                          
    libglib:                           2.72.1-hfbcb929_0                           conda-forge                                          
    libiconv:                          1.16-haf1e3a3_0                             conda-forge                                          
    libidn2:                           2.3.3-hac89ed1_0                            conda-forge                                          
    liblapack:                         3.9.0-16_osx64_openblas                     conda-forge                                          
    liblapacke:                        3.9.0-16_osx64_openblas                     conda-forge                                          
    libllvm10:                         10.0.1-h009f743_3                           conda-forge                                          
    libllvm13:                         13.0.1-h64f94b2_2                           conda-forge                                          
    libllvm14:                         14.0.4-h41df66c_0                           conda-forge                                          
    libnghttp2:                        1.47.0-h7cbc4dc_1                           conda-forge                                          
    libopenblas:                       0.3.21-openmp_h429af6e_3                    conda-forge                                          
    libpng:                            1.6.37-h5481273_4                           conda-forge                                          
    libsodium:                         1.0.18-hbcb3906_1                           conda-forge                                          
    libsqlite:                         3.39.3-ha978bb4_0                           conda-forge                                          
    libssh2:                           1.10.0-h7535e13_3                           conda-forge                                          
    libtiff:                           4.4.0-hfca7e8f_0                            conda-forge                                          
    libunistring:                      0.9.10-h0d85af4_0                           conda-forge                                          
    libwebp-base:                      1.2.4-h775f41a_0                            conda-forge                                          
    libxcb:                            1.13-h0d85af4_1004                          conda-forge                                          
    libxml2:                           2.9.14-hea49891_4                           conda-forge                                          
    libxslt:                           1.1.35-heaa0ce8_0                           conda-forge                                          
    libzlib:                           1.2.12-hfd90126_4                           conda-forge                                          
    llvm-openmp:                       14.0.4-ha654fa7_0                           conda-forge                                          
    llvm-tools:                        14.0.4-h41df66c_0                           conda-forge                                          
    llvmlite:                          0.36.0-py38h872f124_0                       conda-forge                                          
    lockfile:                          0.12.2-py_1                                 conda-forge                                          
    lxml:                              4.9.1-py38h0dd4459_0                        conda-forge                                          
    lz4:                               4.0.0-py38h5cd37e2_2                        conda-forge                                          
    lz4-c:                             1.9.3-he49afe7_1                            conda-forge                                          
    mafft:                             7.505-ha5712d3_0                            bioconda                                             
    make:                              4.3-h22f3db7_1                              conda-forge                                          
    markupsafe:                        2.1.1-py38hed1de0f_1                        conda-forge                                          
    matplotlib:                        3.5.3-py38h50d1736_2                        conda-forge                                          
    matplotlib-base:                   3.5.3-py38hae485fc_2                        conda-forge                                          
    matplotlib-inline:                 0.1.6-pyhd8ed1ab_0                          conda-forge                                          
    mpc:                               1.2.1-hbb51d92_0                            conda-forge                                          
    mpfr:                              4.1.0-h0f52abe_1                            conda-forge                                          
    msgpack-python:                    1.0.4-py38hf58141a_0                        conda-forge                                          
    munkres:                           1.1.4-pyh9f0ad1d_0                          conda-forge                                          
    natsort:                           8.2.0-pyhd8ed1ab_0                          conda-forge                                          
    nbformat:                          5.4.0-pyhd8ed1ab_0                          conda-forge                                          
    ncurses:                           6.3-h96cf925_1                              conda-forge                                          
    nest-asyncio:                      1.5.5-pyhd8ed1ab_0                          conda-forge                                          
    networkx:                          2.8.6-pyhd8ed1ab_0                          conda-forge                                          
    nose:                              1.3.7-py_1006                               conda-forge                                          
    numba:                             0.53.1-py38h5b9a75a_1                       conda-forge                                          
    numpy:                             1.23.2-py38h84cd246_0                       conda-forge                                          
    openjdk:                           17.0.3-hbc0c0cd_2                           conda-forge                                          
    openjpeg:                          2.5.0-h5d0d7b0_1                            conda-forge                                          
    openssl:                           1.1.1q-hfe4f2af_0                           conda-forge                                          
    packaging:                         21.3-pyhd8ed1ab_0                           conda-forge                                          
    pandas:                            1.4.4-py38h5e0dbaf_0                        conda-forge                                          
    pango:                             1.50.9-hc8ec20f_0                           conda-forge                                          
    parso:                             0.8.3-pyhd8ed1ab_0                          conda-forge                                          
    patsy:                             0.5.2-pyhd8ed1ab_0                          conda-forge                                          
    pbzip2:                            1.1.13-h9d27c22_1                           conda-forge                                          
    pcre:                              8.45-he49afe7_0                             conda-forge                                          
    pcre2:                             10.37-h3f55489_1                            conda-forge                                          
    perl:                              5.32.1-2_h0d85af4_perl5                     conda-forge                                          
    perl-archive-tar:                  2.40-pl5321hdfd78af_0                       bioconda                                             
    perl-carp:                         1.50-pl5321hd8ed1ab_0                       conda-forge                                          
    perl-common-sense:                 3.75-pl5321hd8ed1ab_0                       conda-forge                                          
    perl-compress-raw-bzip2:           2.201-pl5321h775f41a_0                      conda-forge                                          
    perl-compress-raw-zlib:            2.202-pl5321h775f41a_0                      conda-forge                                          
    perl-encode:                       3.19-pl5321hb7f2c08_0                       conda-forge                                          
    perl-exporter:                     5.74-pl5321hd8ed1ab_0                       conda-forge                                          
    perl-exporter-tiny:                1.002002-pl5321hd8ed1ab_0                   conda-forge                                          
    perl-extutils-makemaker:           7.64-pl5321hd8ed1ab_0                       conda-forge                                          
    perl-io-compress:                  2.106-pl5321h9722bc1_1                      bioconda                                             
    perl-io-zlib:                      1.11-pl5321hdfd78af_0                       bioconda                                             
    perl-json:                         4.09-pl5321hdfd78af_0                       bioconda                                             
    perl-json-xs:                      2.34-pl5321hcd10b59_5                       bioconda                                             
    perl-list-moreutils:               0.430-pl5321hdfd78af_0                      bioconda                                             
    perl-list-moreutils-xs:            0.430-pl5321ha5712d3_1                      bioconda                                             
    perl-parent:                       0.238-pl5321hd8ed1ab_0                      conda-forge                                          
    perl-pathtools:                    3.75-pl5321h775f41a_0                       conda-forge                                          
    perl-scalar-list-utils:            1.63-pl5321h775f41a_0                       conda-forge                                          
    perl-storable:                     3.15-pl5321h775f41a_0                       conda-forge                                          
    perl-types-serialiser:             1.01-pl5321hdfd78af_0                       bioconda                                             
    pexpect:                           4.8.0-pyh9f0ad1d_2                          conda-forge                                          
    pickleshare:                       0.7.5-py_1003                               conda-forge                                          
    pigz:                              2.6-h5dbffcc_0                              conda-forge                                          
    pillow:                            9.2.0-py38h7bff4d5_2                        conda-forge                                          
    pip:                               22.2.2-pyhd8ed1ab_0                         conda-forge                                          
    pixman:                            0.40.0-hbcb3906_0                           conda-forge                                          
    pkgutil-resolve-name:              1.3.10-pyhd8ed1ab_0                         conda-forge                                          
    pluggy:                            1.0.0-py38h50d1736_3                        conda-forge                                          
    prompt-toolkit:                    3.0.31-pyha770c72_0                         conda-forge                                          
    psutil:                            5.9.2-py38hef030d1_0                        conda-forge                                          
    pthread-stubs:                     0.4-hc929b4f_1001                           conda-forge                                          
    ptyprocess:                        0.7.0-pyhd3deb0d_0                          conda-forge                                          
    pure_eval:                         0.2.2-pyhd8ed1ab_0                          conda-forge                                          
    py:                                1.11.0-pyh6c4a22f_0                         conda-forge                                          
    pycparser:                         2.21-pyhd8ed1ab_0                           conda-forge                                          
    pygments:                          2.13.0-pyhd8ed1ab_0                         conda-forge                                          
    pynndescent:                       0.5.7-pyh6c4a22f_0                          conda-forge                                          
    pyopenssl:                         22.0.0-pyhd8ed1ab_1                         conda-forge                                          
    pyparsing:                         3.0.9-pyhd8ed1ab_0                          conda-forge                                          
    pyrsistent:                        0.18.1-py38hed1de0f_1                       conda-forge                                          
    pysocks:                           1.7.1-pyha2e5f31_6                          conda-forge                                          
    pytest:                            7.1.3-py38h50d1736_0                        conda-forge                                          
    python:                            3.8.13-h394c593_0_cpython                   conda-forge                                          
    python-dateutil:                   2.8.2-pyhd8ed1ab_0                          conda-forge                                          
    python-fastjsonschema:             2.16.1-pyhd8ed1ab_0                         conda-forge                                          
    python-isal:                       1.0.1-py38h35d34b1_0                        conda-forge                                          
    python_abi:                        3.8-2_cp38                                  conda-forge                                          
    pytz:                              2022.2.1-pyhd8ed1ab_0                       conda-forge                                          
    pyyaml:                            6.0-py38hed1de0f_4                          conda-forge                                          
    pyzmq:                             23.2.1-py38hde384ec_0                       conda-forge                                          
    q2-alignment:                      2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-composition:                    2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-cutadapt:                       2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-dada2:                          2022.8.0-py38_0                             local                                                
    q2-deblur:                         2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-demux:                          2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-diversity:                      2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-diversity-lib:                  2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-emperor:                        2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-feature-classifier:             2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-feature-table:                  2022.8.1-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-fragment-insertion:             2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-gneiss:                         2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-longitudinal:                   2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-metadata:                       2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-mystery-stew:                   2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-phylogeny:                      2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-quality-control:                2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-quality-filter:                 2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-sample-classifier:              2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-taxa:                           2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-types:                          2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2-vsearch:                        2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2cli:                             2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2galaxy:                          2022.8.1-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    q2templates:                       2022.8.0-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    qiime2:                            2022.8.3-py38_0                             https://packages.qiime2.org/qiime2/2022.8/staged/core
    qiime2-core:                       2022.09.09.02.23.00-py38pl5321r41h3e9a1b2_0 https://packages.qiime2.org/qiime2/2022.8/staged/core
    r-backports:                       1.4.1-r41h815d134_1                         conda-forge                                          
    r-base:                            4.1.3-h85fa70c_2                            conda-forge                                          
    r-bh:                              1.78.0_0-r41hc72bb7e_0                      conda-forge                                          
    r-bitops:                          1.0_7-r41h67d6963_0                         conda-forge                                          
    r-brio:                            1.1.3-r41h815d134_1                         conda-forge                                          
    r-callr:                           3.7.2-r41hc72bb7e_0                         conda-forge                                          
    r-cli:                             3.4.0-r41h49197e3_0                         conda-forge                                          
    r-cluster:                         2.1.3-r41h8e0a2a9_0                         conda-forge                                          
    r-colorspace:                      2.0_3-r41h815d134_1                         conda-forge                                          
    r-crayon:                          1.5.1-r41hc72bb7e_0                         conda-forge                                          
    r-deldir:                          1.0_6-r41he3b5f32_0                         conda-forge                                          
    r-desc:                            1.4.2-r41hc72bb7e_0                         conda-forge                                          
    r-diffobj:                         0.3.5-r41h28b5c78_0                         conda-forge                                          
    r-digest:                          0.6.29-r41h49197e3_1                        conda-forge                                          
    r-ellipsis:                        0.3.2-r41h815d134_1                         conda-forge                                          
    r-evaluate:                        0.16-r41hc72bb7e_0                          conda-forge                                          
    r-fansi:                           1.0.3-r41h815d134_1                         conda-forge                                          
    r-farver:                          2.1.1-r41h49197e3_1                         conda-forge                                          
    r-formatr:                         1.12-r41hc72bb7e_0                          conda-forge                                          
    r-fs:                              1.5.2-r41h49197e3_2                         conda-forge                                          
    r-futile.logger:                   1.4.3-r41hc72bb7e_1003                      conda-forge                                          
    r-futile.options:                  1.0.1-r41hc72bb7e_1002                      conda-forge                                          
    r-getopt:                          1.20.3-r41ha770c72_2                        conda-forge                                          
    r-ggplot2:                         3.3.6-r41hc72bb7e_0                         conda-forge                                          
    r-glue:                            1.6.2-r41h815d134_1                         conda-forge                                          
    r-gtable:                          0.3.1-r41hc72bb7e_0                         conda-forge                                          
    r-hwriter:                         1.3.2.1-r41hc72bb7e_0                       conda-forge                                          
    r-interp:                          1.1_3-r41h8619c4b_0                         conda-forge                                          
    r-isoband:                         0.2.5-r41h9951f98_0                         conda-forge                                          
    r-jpeg:                            0.1_9-r41h28b5c78_0                         conda-forge                                          
    r-jsonlite:                        1.8.0-r41h0f1d5c4_0                         conda-forge                                          
    r-labeling:                        0.4.2-r41hc72bb7e_1                         conda-forge                                          
    r-lambda.r:                        1.2.4-r41hc72bb7e_1                         conda-forge                                          
    r-lattice:                         0.20_45-r41h815d134_1                       conda-forge                                          
    r-latticeextra:                    0.6_30-r41hc72bb7e_0                        conda-forge                                          
    r-lifecycle:                       1.0.1-r41hc72bb7e_0                         conda-forge                                          
    r-magrittr:                        2.0.3-r41h815d134_1                         conda-forge                                          
    r-mass:                            7.3_58.1-r41h815d134_1                      conda-forge                                          
    r-matrix:                          1.4_1-r41ha2825d1_0                         conda-forge                                          
    r-matrixstats:                     0.62.0-r41h815d134_1                        conda-forge                                          
    r-mgcv:                            1.8_40-r41h60b693f_0                        conda-forge                                          
    r-munsell:                         0.5.0-r41hc72bb7e_1004                      conda-forge                                          
    r-nlme:                            3.1_159-r41h225c1e1_0                       conda-forge                                          
    r-optparse:                        1.7.3-r41hc72bb7e_0                         conda-forge                                          
    r-permute:                         0.9_7-r41hc72bb7e_0                         conda-forge                                          
    r-pillar:                          1.8.1-r41hc72bb7e_0                         conda-forge                                          
    r-pkgconfig:                       2.0.3-r41hc72bb7e_1                         conda-forge                                          
    r-pkgload:                         1.3.0-r41hc72bb7e_0                         conda-forge                                          
    r-plyr:                            1.8.7-r41h49197e3_1                         conda-forge                                          
    r-png:                             0.1_7-r41h815d134_1005                      conda-forge                                          
    r-praise:                          1.0.0-r41hc72bb7e_1005                      conda-forge                                          
    r-processx:                        3.7.0-r41h67d6963_0                         conda-forge                                          
    r-ps:                              1.7.1-r41h815d134_1                         conda-forge                                          
    r-r6:                              2.5.1-r41hc72bb7e_0                         conda-forge                                          
    r-rcolorbrewer:                    1.1_3-r41h785f33e_0                         conda-forge                                          
    r-rcpp:                            1.0.9-r41h49197e3_2                         conda-forge                                          
    r-rcppeigen:                       0.3.3.9.2-r41hde7ee74_0                     conda-forge                                          
    r-rcppparallel:                    5.1.5-r41h8619c4b_0                         conda-forge                                          
    r-rcurl:                           1.98_1.8-r41h67d6963_0                      conda-forge                                          
    r-rematch2:                        2.1.2-r41hc72bb7e_1                         conda-forge                                          
    r-reshape2:                        1.4.4-r41h9951f98_1                         conda-forge                                          
    r-rlang:                           1.0.5-r41h49197e3_0                         conda-forge                                          
    r-rprojroot:                       2.0.3-r41hc72bb7e_0                         conda-forge                                          
    r-scales:                          1.2.1-r41hc72bb7e_0                         conda-forge                                          
    r-snow:                            0.4_4-r41hc72bb7e_0                         conda-forge                                          
    r-stringi:                         1.7.8-r41h7183e51_1                         conda-forge                                          
    r-stringr:                         1.4.1-r41hc72bb7e_0                         conda-forge                                          
    r-testthat:                        3.1.4-r41h8619c4b_0                         conda-forge                                          
    r-tibble:                          3.1.8-r41h67d6963_0                         conda-forge                                          
    r-utf8:                            1.2.2-r41h815d134_1                         conda-forge                                          
    r-vctrs:                           0.4.1-r41hc4bb905_0                         conda-forge                                          
    r-vegan:                           2.6_2-r41h6f100c1_0                         conda-forge                                          
    r-viridislite:                     0.4.1-r41hc72bb7e_0                         conda-forge                                          
    r-waldo:                           0.4.0-r41hc72bb7e_0                         conda-forge                                          
    r-withr:                           2.5.0-r41hc72bb7e_0                         conda-forge                                          
    raxml:                             8.2.12-ha5712d3_4                           bioconda                                             
    readline:                          8.1.2-h3899abd_0                            conda-forge                      
    requests:                          2.28.1-pyhd8ed1ab_1                         conda-forge                                          
    samtools:                          1.15.1-h9f30945_0                           bioconda                                             
    scikit-bio:                        0.5.7-py38hbe852b5_0                        conda-forge                                          
    scikit-learn:                      0.24.1-py38hfd19401_0                       conda-forge                                          
    scipy:                             1.8.1-py38hb261484_2                        conda-forge                                          
    seaborn:                           0.12.0-hd8ed1ab_0                           conda-forge                                          
    seaborn-base:                      0.12.0-pyhd8ed1ab_0                         conda-forge                                          
    sepp:                              4.3.10-py38h3252c3a_2                       bioconda                                             
    setuptools:                        65.3.0-pyhd8ed1ab_1                         conda-forge                                          
    sigtool:                           0.1.3-h57ddcff_0                            conda-forge                                          
    six:                               1.16.0-pyh6c4a22f_0                         conda-forge                                          
    sortmerna:                         2.0-h5c9b4e4_4                              bioconda                                             
    sqlite:                            3.39.3-h9ae0607_0                           conda-forge                                          
    stack_data:                        0.5.0-pyhd8ed1ab_0                          conda-forge                                          
    statsmodels:                       0.13.2-py38hc1426ef_0                       conda-forge                                          
    tapi:                              1100.0.11-h9ce4665_0                        conda-forge                                          
    tbb:                               2020.2-h940c156_4                           conda-forge                                          
    threadpoolctl:                     3.1.0-pyh8a188c0_0                          conda-forge                                          
    tk:                                8.6.12-h5dbffcc_0                           conda-forge                                          
    tktable:                           2.10-h49f0cf7_3                             conda-forge                                          
    tomli:                             2.0.1-pyhd8ed1ab_0                          conda-forge                                          
    tornado:                           6.2-py38h0dd4459_0                          conda-forge                                          
    tqdm:                              4.64.1-pyhd8ed1ab_0                         conda-forge                                          
    traitlets:                         5.3.0-pyhd8ed1ab_0                          conda-forge                                          
    typing_extensions:                 4.3.0-pyha770c72_0                          conda-forge                                          
    tzlocal:                           2.1-pyh9f0ad1d_0                            conda-forge                                          
    umap-learn:                        0.5.3-py38h50d1736_0                        conda-forge                                          
    unicodedata2:                      14.0.0-py38hed1de0f_1                       conda-forge                                          
    unifrac:                           1.1.1-py38h6da613f_0                        bioconda                                             
    unifrac-binaries:                  1.1.1-h8c74715_4                            bioconda                                             
    urllib3:                           1.26.11-pyhd8ed1ab_0                        conda-forge                                          
    vsearch:                           2.21.1-h1a264f4_1                           bioconda                                             
    wcwidth:                           0.2.5-pyh9f0ad1d_2                          conda-forge                                          
    wget:                              1.20.3-h52ee1ee_1                           conda-forge                                          
    wheel:                             0.37.1-pyhd8ed1ab_0                         conda-forge                                          
    widgetsnbextension:                4.0.3-pyhd8ed1ab_0                          conda-forge                                          
    xopen:                             1.6.0-py38h50d1736_0                        conda-forge                                          
    xorg-libxau:                       1.0.9-h35c211d_0                            conda-forge                                          
    xorg-libxdmcp:                     1.1.3-h35c211d_0                            conda-forge                                          
    xz:                                5.2.6-h775f41a_0                            conda-forge                                          
    yaml:                              0.2.5-h0d85af4_2                            conda-forge                                          
    zeromq:                            4.3.4-he49afe7_1                            conda-forge                                          
    zipp:                              3.8.1-pyhd8ed1ab_0                          conda-forge                                          
    zlib:                              1.2.12-hfd90126_4                           conda-forge                                          
    zstd:                              1.5.2-hfa58983_4                            conda-forge

Environment info

active environment : base
    active env location : /usr/local/miniconda
            shell level : 1
       user config file : /Users/runner/.condarc
 populated config files : /Users/runner/.condarc
          conda version : 22.9.0
    conda-build version : 3.22.0
         python version : 3.9.13.final.0
       virtual packages : __osx=11.7=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /usr/local/miniconda  (writable)
      conda av data dir : /usr/local/miniconda/etc/conda
  conda av metadata url : None
           channel URLs : https://repo.anaconda.com/pkgs/main/osx-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/osx-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /usr/local/miniconda/pkgs
                          /Users/runner/.conda/pkgs
       envs directories : /usr/local/miniconda/envs
                          /Users/runner/.conda/envs
               platform : osx-64
             user-agent : conda/22.9.0 requests/2.28.1 CPython/3.9.13 Darwin/20.6.0 OSX/11.7
                UID:GID : 501:20
             netrc file : None
           offline mode : False
ebolyen commented 1 year ago

Relevant CI runs:

And a forum issue from one of our users:

https://forum.qiime2.org/t/errors-running-dada2-rcpp-not-loading-due-to-png-dylib-version-issue/24506/16

isuruf commented 1 year ago

@conda-forge-admin, rerender

conda-forge-linter commented 1 year ago

Hi! This is the friendly automated conda-forge-webservice.

I just wanted to let you know that I rerendered the recipe in conda-forge/r-png-feedstock#11.