Upgrade to 10.3 - Githubissues

saraedum commented 4 months ago

Fixes #96.

Dependencies:

[x] https://github.com/conda-forge/normaliz-feedstock/pull/53
[x] Upgrade GAP to FLINT 3 (requires normaliz, see https://conda-forge.org/status/migration/libflint30)
[x] https://github.com/conda-forge/sagelib-feedstock/pull/174

Dependency changes

[x] sagelib 10.2 → 10.3
[x] alabaster 0.7.12 → 0.7.16
[x] anyio missing → 4.0.0 (does not seem relevant)
[x] arrow missing → 1.3.0 (does not seem relevant)
[x] asttokens 2.1.0 → 2.4.1 (not a dependency currently)
[x] async_lru missing → 2.0.4 (does not seem relevant)
[x] babel 2.12.1 → 2.14.0
[x] beautifulsoup4 4.11.1 → 4.12.2 (not a dependency currently)
[x] bleach 5.0.1 → 6.1.0
[x] certifi 2023.7.22 → 2023.11.17 (should be up-to-date already)
[x] charset_normalizer 2.1.1 → 3.3.2 (not a dependency currently)
[x] cmake 3.27.3 → 3.27.8 (not a dependency currently)
[x] comm missing → 0.1.4 (does not seem relevant)
[x] configure (not relevant for us)
[x] conway_polynomials 0.5 → 0.8
[x] cvxopt 1.3.0 → 1.3.2
[x] cvxpy 1.3.0 → 1.4.1 (not a dependency currently)
[x] cylp 0.91.5 → 0.92.2
[x] cython 3.0.4 → 3.0.7 (should be up-to-date)
[x] database_knotinfo 2023.6.1 → 2024.2.1 (not a dependency currently)
[x] debugpy 1.6.3 → 1.8.0 (not a dependency currently)
[x] distlib 0.3.7 → 0.3.8 (not a dependency currently)
[x] docutils 0.19 → 0.20.1
[x] e_antic 1.3.0 → 2.0.0 (not a dependency currently)
[x] ecl 21.2.1 → 23.9.9 (update not needed)
[x] eclib 20230424 → 20231212 (should be up-to-date)
[x] exceptiongroup missing → 1.2.0 (does not seem relevant)
[x] filelock 3.12.3 → 3.13.1 (not a dependency currently)
[x] flint 2.9.0 → 3.0.1 (need to pull in migration)
[x] fqdn missing → 1.5.1 (does not seem relevant)
[x] furo 2022.9.29 → 2023.9.10 (not a dependency currently)
[x] gmp 6.2.1 → 6.3.0 (already on conda-forge)
[x] gmpy2 2.1.2 → 2.2.0a1 (update not needed)
[x] gnumake_tokenpool missing → 0.0.4 (does not seem relevant)
[x] h11 missing → 0.14.0 (does not seem relevant)
[x] hatch_vcs 0.3.0 → 0.4.0 (does not seem relevant)
[x] hatchling 1.18.0 → 1.20.0 (does not seem relevant)
[x] httpcore missing → 1.0.4 (does not seem relevant)
[x] httpx missing → 0.27.0 (does not seem relevant)
[x] idna 3.4 → 3.6 (not a dependency currently)
[x] igraph 0.10.4 → 0.10.8 (not a dependency currently)
[x] importlib_metadata 6.8.0 → 7.0.1 (not a dependency currently)
[x] importlib_resources 6.0.1 → 6.1.1 (not a dependency currently)
[x] ipykernel 6.6.0 → 6.27.1 (not a dependency currently)
[x] ipython 8.6.0 → 8.18.1
[x] ipywidgets 8.0.2 → 8.1.1
[x] isoduration missing → 20.11.0 (does not seem relevant)
[x] jedi 0.18.1 → 0.19.1 (not a dependency currently)
[x] jinja2 3.1.2 → 3.1.3 (the exact pin probably does not matter)
[x] json5 missing → 0.9.14 (does not seem relevant)
[x] jsonpointer missing → 2.4 (does not seem relevant)
[x] jsonschema 4.17.1 → 4.17.3
[x] jsonschema_specifications missing → 2023.3.3 (does not seem relevant)
[x] jupyter_client 7.4.4 → 8.3.1
[x] jupyter_core 4.12.0 → 5.3.2
[x] jupyter_events missing → 0.6.3 (does not seem relevant)
[x] jupyter_lsp missing → 2.2.0 (does not seem relevant)
[x] jupyter_server missing → 2.7.3 (does not seem relevant)
[x] jupyter_server_terminals missing → 0.4.4 (does not seem relevant)
[x] jupyterlab missing → 4.1.3 (does not seem relevant)
[x] jupyterlab_mathjax2 missing → 4.0.0 (does not seem relevant)
[x] jupyterlab_pygments 0.1.2 → 0.2.2 (does not seem relevant)
[x] jupyterlab_server missing → 2.24.0 (does not seem relevant)
[x] jupyterlab_widgets 3.0.3 → 3.0.9 (does not seem relevant)
[x] markupsafe 2.1.3 → 2.1.4 (not a dependency currently)
[x] matroid_database missing → 0.2 (does not seem relevant)
[x] meson 1.2.3 → 1.3.1 (not a dependency currently)
[x] meson_python 0.14.0 → 0.15.0 (not a dependency currently)
[x] mpc 1.1.0 → 1.3.1 (the exact pin probably does not matter)
[x] mpfr 4.0.1.p0 → 4.2.1 (the exact pin probably does not matter)
[x] mpfrcx 0.5 → 0.6.3 (not a dependency currently)
[x] nauty 2.8.6.p1 → 2.8.8.p0
[x] nbclient 0.7.0 → 0.8.0
[x] nbconvert 7.2.3 → 7.9.2
[x] nbformat 5.7.0 → 5.9.2
[x] nest_asyncio 1.5.6 → 1.5.8 (not a dependency currently)
[x] networkx 3.1 → 3.2.1
[x] normaliz 3.10.1 → 3.10.1.p0 (not a dependency currently)
[x] notebook 6.4.12 → 7.1.1
[x] notebook_shim missing → 0.2.3 (does not seem relevant)
[x] numpy 1.26.1 → 1.26.3 (the exact pin probably does not matter)
[x] openblas 0.3.25 → 0.3.26 (the exact pin probably does not matter)
[x] osqp_python 0.6.2.post8 → 0.6.3 (not a dependency currently)
[x] overrides missing → 7.4.0 (does not seem relevant)
[x] pathspec 0.10.2 → 0.12.1 (not a dependency currently)
[x] pexpect 4.8.0 → 4.9.0
[x] platformdirs 3.11.0 → 4.1.0 (not a dependency currently)
[x] polymake 4.9 → 4.11 (not a dependency currently)
[x] prompt_toolkit 3.0.24 → 3.0.43 (not a dependency currently)
[x] psutil missing → 5.9.6 (does not seem relevant)
[x] pygments 2.13.0 → 2.17.2
[x] pynormaliz 2.18 → 2.18.p0 (not a dependency currently)
[x] pyrsistent 0.19.2 → 0.19.3 (not a dependency currently)
[x] python_igraph 0.10.4 → 0.11.3 (not a dependency currently)
[x] python_json_logger missing → 2.0.7 (does not seem relevant)
[x] pyyaml missing → 6.0.1 (does not seem relevant)
[x] qepcad B.1.72 → 1.74 (not a dependency currently)
[x] referencing missing → 0.23.0 (does not seem relevant)
[x] requests 2.28.1 → 2.31.0 (does not seem relevant)
[x] rfc3339_validator missing → 0.1.4 (does not seem relevant)
[x] rfc3986_validator missing → 0.1.1 (does not seem relevant)
[x] saclib 2.2.7 → 2.2.8 (not a dependency currently)
[x] scipy 1.11.3 → 1.11.4
[x] scs 3.2.2 → 3.2.3 (not a dependency currently)
[x] setuptools 68.2.2 → 69.0.2 (the exact pin should not matter)
[x] sniffio missing → 1.3.0 (does not seem relevant)
[x] soupsieve 2.3.2.post1 → 2.5 (not a dependency currently)
[x] sphinx 5.2.3 → 7.2.6
[x] sphinx_basic_ng 0.0.1a12 → 1.0.0b2 (not a dependency currently)
[x] sphinx_copybutton 0.5.1 → 0.5.2 (not a dependency currently)
[x] sphinx_inline_tabs missing → 2023.4.21 (does not seem relevant)
[x] sphinxcontrib_applehelp 1.0.2 → 1.0.8 (not a dependency currently)
[x] sphinxcontrib_devhelp 1.0.2 → 1.0.6 (not a dependency currently)
[x] sphinxcontrib_htmlhelp 2.0.0 → 2.0.5 (not a dependency currently)
[x] sphinxcontrib_qthelp 1.0.3 → 1.0.7 (not a dependency currently)
[x] sphinxcontrib_serializinghtml 1.1.5 → 1.1.10 (not a dependency currently)
[x] sphinxcontrib_websupport 1.2.4 → 1.2.7 (not a dependency currently)
[x] stack_data 0.6.1 → 0.6.3 (not a dependency currently)
[x] symengine 0.10.1 → 0.11.2 (not a dependency currently)
[x] symengine_py 0.10.0 → 0.11.0 (not a dependency currently)
[x] terminado 0.17.0 → 0.17.1
[x] texttable 1.6.7 → 1.7.0 (not a dependency currently)
[x] tornado 6.2 → 6.4
[x] traitlets 5.9.0 → 5.14.0
[x] trove_classifiers 2023.8.7 → 2023.11.29 (not a dependency currently)
[x] types_python_dateutil missing → 2.8.19.14 (does not seem relevant)
[x] typing_extensions 4.7.1 → 4.8.0 (not a dependency currently)
[x] tzdata 2022.6 → 2023.3 (not a dependency currently)
[x] uri_template missing → 1.3.0 (does not seem relevant)
[x] urllib3 1.26.12 → 2.1.0 (not a dependency currently)
[x] virtualenv 20.24.4 → 20.25.0 (not a dependency currently)
[x] wcwidth 0.2.5 → 0.2.12
[x] webcolors missing → 1.13 (does not seem relevant)
[x] websocket_client missing → 1.6.4 (does not seem relevant)
[x] wheel 0.41.2 → 0.42.0 (the exact version should not matter)
[x] widgetsnbextension 4.0.8 → 4.0.9
[x] zipp 3.11.0 → 3.17.0 (not a dependency currently)

saraedum commented 4 months ago

@conda-forge-admin, please rerender.

conda-forge-webservices[bot] commented 4 months ago

Hi! This is the friendly automated conda-forge-linting service.

I just wanted to let you know that I linted all conda-recipes in your PR (recipe) and found it was in an excellent condition.

I do have some suggestions for making it better though...

For recipe:

In conda-forge.yml: $.build_with_mambabuild = True.

'Build With Mambabuild' is deprecated. build_with_mambabuild is deprecated, use conda_build_tool instead.

Schema

{
  "anyOf": [
    {
      "type": "boolean"
    },
    {
      "type": "null"
    }
  ],
  "default": true,
  "deprecated": true,
  "title": "Build With Mambabuild"
}

conda-forge-webservices[bot] commented 4 months ago

Hi! This is the friendly automated conda-forge-linting service.

I wanted to let you know that I linted all conda-recipes in your PR (recipe) and found some lint.

Here's what I've got...

For recipe:

In conda-forge.yml: $.conda_build_tool = mamba.

'mamba' is not valid under any of the given schemas

Schema

{
  "anyOf": [
    {
      "enum": [
        "conda-build",
        "conda-build+classic",
        "conda-build+conda-libmamba-solver",
        "mambabuild"
      ],
      "type": "string"
    },
    {
      "type": "null"
    }
  ],
  "default": "conda-build",
  "title": "Conda Build Tool"
}

conda-forge-webservices[bot] commented 4 months ago

Hi! This is the friendly automated conda-forge-linting service.

I just wanted to let you know that I linted all conda-recipes in your PR (recipe) and found it was in an excellent condition.

saraedum commented 3 months ago

That looks pretty good.

2024-05-25T21:50:42.6129927Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/interfaces/process.pyx  # 1 doctest failed
2024-05-25T21:50:42.6132418Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/interfaces/singular.py  # 2 doctests failed
2024-05-25T21:50:42.6134618Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/matrix/matrix_double_dense.pyx  # 1 doctest failed
2024-05-25T21:50:42.6136655Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/misc/inline_fortran.py  # 3 doctests failed
2024-05-25T21:50:42.6138384Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/misc/persist.pyx  # 2 doctests failed
2024-05-25T21:50:42.6140306Z sage -t --random-seed=44593750211497097011109367318015638273 src/sage/repl/ipython_extension.py  # 4 doctests failed

conda-forge / sage-feedstock

Upgrade to 10.3 #97

Dependencies:

Dependency changes